Insufficient scRNA-seq data for expression of BRME1 at single-cell level.
Insufficient scRNA-seq data for expression of BRME1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 223.67 | 2620 / 2642 | 99% | 9.79 | 696 / 705 |
ovary | 100% | 187.09 | 180 / 180 | 91% | 7.56 | 391 / 430 |
uterus | 98% | 168.84 | 167 / 170 | 90% | 13.95 | 413 / 459 |
skin | 87% | 252.83 | 1581 / 1809 | 88% | 7.95 | 416 / 472 |
breast | 98% | 191.51 | 452 / 459 | 76% | 5.11 | 853 / 1118 |
bladder | 100% | 122.62 | 21 / 21 | 62% | 3.92 | 311 / 504 |
intestine | 99% | 228.95 | 959 / 966 | 61% | 3.53 | 324 / 527 |
esophagus | 98% | 174.19 | 1420 / 1445 | 61% | 3.27 | 112 / 183 |
stomach | 94% | 99.14 | 336 / 359 | 53% | 3.12 | 151 / 286 |
lung | 92% | 97.31 | 529 / 578 | 43% | 2.08 | 501 / 1155 |
thymus | 98% | 103.17 | 641 / 653 | 34% | 0.92 | 203 / 605 |
pancreas | 100% | 274.02 | 328 / 328 | 30% | 1.25 | 53 / 178 |
prostate | 98% | 178.24 | 241 / 245 | 17% | 0.52 | 86 / 502 |
liver | 78% | 65.07 | 177 / 226 | 31% | 1.33 | 127 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.74 | 1 / 1 |
adrenal gland | 74% | 51.52 | 191 / 258 | 25% | 1.02 | 57 / 230 |
spleen | 99% | 95.41 | 238 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 16.66 | 42 / 45 |
kidney | 85% | 66.60 | 76 / 89 | 7% | 0.26 | 66 / 901 |
adipose | 92% | 98.60 | 1104 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 91% | 81.17 | 1212 / 1335 | 0% | 0 | 0 / 0 |
muscle | 47% | 33.42 | 378 / 803 | 0% | 0 | 0 / 0 |
heart | 36% | 20.76 | 310 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 25% | 16.70 | 232 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 0.59 | 18 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.09 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_1990918 | Biological process | double-strand break repair involved in meiotic recombination |
GO_0007144 | Biological process | female meiosis I |
GO_0005575 | Cellular component | cellular_component |
GO_0005694 | Cellular component | chromosome |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | BRME1 |
Protein name | Alternative protein C19orf57 Break repair meiotic recombinase recruitment factor 1 Break repair meiotic recombinase recruitment factor 1 (Pre-T/NK cell-associated protein 3B3) |
Synonyms | C19orf57 |
Description | FUNCTION: Meiotic recombination factor component of recombination bridges involved in meiotic double-strand break repair. Modulates the localization of recombinases DMC1:RAD51 to meiotic double-strand break (DSB) sites through the interaction with and stabilization of the BRCA2:HSF2BP complex during meiotic recombination. Indispensable for the DSB repair, homologous synapsis, and crossover formation that are needed for progression past metaphase I, is essential for spermatogenesis and male fertility. . |
Accessions | ENST00000586783.6 [Q0VDD7-1] ENST00000672786.1 [Q0VDD7-2] K7ELK3 Q0VDD7 ENST00000672170.1 [Q0VDD7-1] ENST00000346736.6 [Q0VDD7-2] L8EC49 ENST00000588115.5 K7EMZ7 ENST00000585755.1 ENST00000591586.5 K7EP60 |