Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 7 studies | 32% ± 10% | |
astrocyte | 5 studies | 31% ± 13% | |
dendritic cell | 4 studies | 21% ± 4% | |
glutamatergic neuron | 4 studies | 37% ± 20% | |
interneuron | 4 studies | 35% ± 22% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
endothelial cell | 3 studies | 18% ± 1% | |
mucosal invariant T cell | 3 studies | 20% ± 2% | |
lymphocyte | 3 studies | 25% ± 11% | |
B cell | 3 studies | 17% ± 1% | |
macrophage | 3 studies | 23% ± 8% | |
GABAergic neuron | 3 studies | 38% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 40% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 735.42 | 2640 / 2642 | 100% | 8.33 | 705 / 705 |
esophagus | 100% | 522.36 | 1444 / 1445 | 99% | 7.55 | 182 / 183 |
stomach | 100% | 397.38 | 359 / 359 | 99% | 6.01 | 284 / 286 |
lung | 100% | 508.04 | 577 / 578 | 99% | 6.95 | 1146 / 1155 |
breast | 100% | 522.11 | 459 / 459 | 99% | 6.94 | 1104 / 1118 |
skin | 100% | 679.06 | 1809 / 1809 | 99% | 8.69 | 466 / 472 |
intestine | 100% | 448.64 | 966 / 966 | 99% | 6.07 | 520 / 527 |
prostate | 100% | 535.00 | 245 / 245 | 98% | 4.69 | 494 / 502 |
ovary | 100% | 386.14 | 180 / 180 | 98% | 5.93 | 422 / 430 |
pancreas | 100% | 432.30 | 327 / 328 | 98% | 4.71 | 175 / 178 |
uterus | 100% | 517.79 | 170 / 170 | 98% | 5.39 | 449 / 459 |
thymus | 100% | 414.51 | 652 / 653 | 98% | 4.77 | 591 / 605 |
adrenal gland | 100% | 710.12 | 258 / 258 | 95% | 6.71 | 219 / 230 |
bladder | 100% | 448.48 | 21 / 21 | 95% | 5.07 | 478 / 504 |
kidney | 100% | 409.87 | 89 / 89 | 92% | 4.09 | 827 / 901 |
liver | 100% | 353.90 | 226 / 226 | 80% | 3.38 | 326 / 406 |
adipose | 100% | 486.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 715.26 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.68 | 29 / 29 |
spleen | 100% | 455.92 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.67 | 45 / 45 |
muscle | 100% | 437.86 | 802 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 672.66 | 916 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 5.69 | 77 / 80 |
heart | 96% | 334.89 | 823 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0051036 | Biological process | regulation of endosome size |
GO_0032418 | Biological process | lysosome localization |
GO_1903744 | Biological process | positive regulation of anterograde synaptic vesicle transport |
GO_0062196 | Biological process | regulation of lysosome size |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0098574 | Cellular component | cytoplasmic side of lysosomal membrane |
GO_0005873 | Cellular component | plus-end kinesin complex |
GO_0099078 | Cellular component | BORC complex |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | BORCS5 |
Protein name | BLOC-1-related complex subunit 5 (Loss of heterozygosity 12 chromosomal region 1) (Myristoylated lysosomal protein) (Myrlysin) BLOC-1-related complex subunit 5 |
Synonyms | LOH12CR1 hCG_27699 |
Description | FUNCTION: As part of the BORC complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, the BORC complex may recruit ARL8B and couple lysosomes to microtubule plus-end-directed kinesin motor. Thereby, it may indirectly play a role in cell spreading and motility. . |
Accessions | ENST00000627374.3 [Q969J3-1] ENST00000314565.9 [Q969J3-1] G3V1P3 ENST00000627461.1 [Q969J3-2] ENST00000625206 ENST00000542728.5 ENST00000298571.6 [Q969J3-2] Q969J3 |