Name | Number of supported studies | Average coverage | |
---|---|---|---|
mesothelial cell | 7 studies | 33% ± 23% |
Insufficient scRNA-seq data for expression of BNC1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 2070.42 | 1804 / 1809 | 12% | 1.98 | 55 / 472 |
esophagus | 39% | 955.13 | 558 / 1445 | 60% | 48.98 | 109 / 183 |
tonsil | 0% | 0 | 0 / 0 | 91% | 50.86 | 41 / 45 |
uterus | 2% | 30.01 | 3 / 170 | 55% | 28.48 | 253 / 459 |
lung | 7% | 64.02 | 38 / 578 | 38% | 13.91 | 435 / 1155 |
ovary | 20% | 142.21 | 36 / 180 | 23% | 2.49 | 97 / 430 |
thymus | 0% | 0.59 | 1 / 653 | 39% | 3.11 | 238 / 605 |
adipose | 37% | 1550.17 | 447 / 1204 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 18% | 6.85 | 90 / 504 |
kidney | 1% | 3.90 | 1 / 89 | 15% | 1.31 | 135 / 901 |
breast | 8% | 29.51 | 38 / 459 | 6% | 0.87 | 63 / 1118 |
heart | 12% | 100.98 | 100 / 861 | 0% | 0 | 0 / 0 |
prostate | 4% | 10.32 | 9 / 245 | 0% | 0.01 | 2 / 502 |
intestine | 1% | 3.33 | 10 / 966 | 3% | 0.44 | 14 / 527 |
pancreas | 0% | 0 | 0 / 328 | 3% | 0.82 | 5 / 178 |
blood vessel | 2% | 15.78 | 25 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.06 | 1 / 80 |
liver | 0% | 0 | 0 / 226 | 1% | 0.21 | 5 / 406 |
stomach | 1% | 9.02 | 3 / 359 | 0% | 0.01 | 1 / 286 |
peripheral blood | 1% | 4.00 | 7 / 929 | 0% | 0 | 0 / 0 |
brain | 0% | 0.23 | 2 / 2642 | 1% | 0.05 | 4 / 705 |
spleen | 0% | 0.99 | 1 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.92 | 2 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0007283 | Biological process | spermatogenesis |
GO_0008544 | Biological process | epidermis development |
GO_1900195 | Biological process | positive regulation of oocyte maturation |
GO_0030154 | Biological process | cell differentiation |
GO_0006356 | Biological process | regulation of transcription by RNA polymerase I |
GO_0045943 | Biological process | positive regulation of transcription by RNA polymerase I |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0001216 | Molecular function | DNA-binding transcription activator activity |
GO_0000182 | Molecular function | rDNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | BNC1 |
Protein name | Basonuclin 1 Zinc finger protein basonuclin-1 |
Synonyms | BNC |
Description | FUNCTION: Transcriptional activator (By similarity). It is likely involved in the regulation of keratinocytes terminal differentiation in squamous epithelia and hair follicles . Required for the maintenance of spermatogenesis (By similarity). It is involved in the positive regulation of oocyte maturation, probably acting through the control of BMP15 levels and regulation of AKT signaling cascade . May also play a role in the early development of embryos (By similarity). . |
Accessions | ENST00000569704.2 F5GY04 ENST00000345382.7 Q01954 |