Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 12 studies | 26% ± 6% | |
oligodendrocyte precursor cell | 11 studies | 43% ± 24% | |
endothelial cell | 11 studies | 23% ± 8% | |
smooth muscle cell | 10 studies | 21% ± 6% | |
GABAergic neuron | 8 studies | 45% ± 21% | |
glutamatergic neuron | 8 studies | 54% ± 19% | |
retinal ganglion cell | 7 studies | 69% ± 24% | |
oligodendrocyte | 7 studies | 38% ± 10% | |
amacrine cell | 6 studies | 49% ± 17% | |
astrocyte | 6 studies | 37% ± 14% | |
adipocyte | 5 studies | 22% ± 3% | |
neuron | 5 studies | 38% ± 14% | |
interneuron | 5 studies | 63% ± 23% | |
GABAergic amacrine cell | 4 studies | 48% ± 16% | |
glycinergic amacrine cell | 4 studies | 31% ± 13% | |
retina horizontal cell | 4 studies | 20% ± 3% | |
retinal bipolar neuron | 4 studies | 23% ± 6% | |
cardiac muscle cell | 4 studies | 19% ± 4% | |
OFF-bipolar cell | 4 studies | 42% ± 33% | |
ON-bipolar cell | 4 studies | 40% ± 34% | |
myofibroblast cell | 4 studies | 21% ± 6% | |
muscle cell | 4 studies | 28% ± 9% | |
vein endothelial cell | 4 studies | 30% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9009.63 | 2638 / 2642 | 100% | 118.59 | 703 / 705 |
prostate | 99% | 3315.23 | 243 / 245 | 89% | 17.20 | 446 / 502 |
thymus | 90% | 1375.27 | 587 / 653 | 90% | 35.32 | 546 / 605 |
breast | 98% | 2215.09 | 450 / 459 | 77% | 30.07 | 860 / 1118 |
kidney | 98% | 1883.56 | 87 / 89 | 76% | 13.78 | 683 / 901 |
adrenal gland | 70% | 853.97 | 181 / 258 | 91% | 51.04 | 209 / 230 |
pancreas | 64% | 833.46 | 210 / 328 | 89% | 28.46 | 159 / 178 |
ovary | 100% | 3230.02 | 180 / 180 | 44% | 7.71 | 189 / 430 |
bladder | 100% | 4315.19 | 21 / 21 | 42% | 7.58 | 214 / 504 |
uterus | 99% | 4079.35 | 169 / 170 | 40% | 12.89 | 184 / 459 |
lung | 85% | 1242.06 | 492 / 578 | 44% | 7.44 | 513 / 1155 |
skin | 77% | 1309.35 | 1395 / 1809 | 51% | 13.97 | 241 / 472 |
esophagus | 80% | 3180.10 | 1149 / 1445 | 40% | 5.26 | 74 / 183 |
liver | 60% | 807.92 | 135 / 226 | 60% | 10.36 | 243 / 406 |
intestine | 85% | 3108.15 | 821 / 966 | 33% | 5.77 | 175 / 527 |
stomach | 67% | 1658.41 | 240 / 359 | 42% | 6.91 | 121 / 286 |
blood vessel | 100% | 4850.00 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.45 | 1 / 1 |
muscle | 100% | 5134.63 | 802 / 803 | 0% | 0 | 0 / 0 |
adipose | 100% | 2918.84 | 1199 / 1204 | 0% | 0 | 0 / 0 |
heart | 93% | 2843.06 | 805 / 861 | 0% | 0 | 0 / 0 |
spleen | 59% | 699.29 | 142 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 38% | 3.91 | 11 / 29 |
eye | 0% | 0 | 0 / 0 | 35% | 6.95 | 28 / 80 |
tonsil | 0% | 0 | 0 / 0 | 20% | 2.86 | 9 / 45 |
peripheral blood | 0% | 2.93 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007019 | Biological process | microtubule depolymerization |
GO_0021822 | Biological process | negative regulation of cell motility involved in cerebral cortex radial glia guided migration |
GO_0021814 | Biological process | cell motility involved in cerebral cortex radial glia guided migration |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005515 | Molecular function | protein binding |
Gene name | BMERB1 |
Protein name | bMERB domain-containing protein 1 BMERB domain containing 1 (bMERB domain-containing protein 1) BMERB domain containing 1 |
Synonyms | C16orf45 |
Description | |
Accessions | H3BTT5 ENST00000631695.1 ENST00000631883.1 H3BRF6 ENST00000632906.1 ENST00000633657.1 ENST00000564389.5 ENST00000561692.5 ENST00000565857.1 ENST00000300006.9 [Q96MC5-1] H3BU79 ENST00000570249.5 Q96MC5 H3BP34 H3BUY6 ENST00000566490.5 ENST00000452191.6 [Q96MC5-2] ENST00000633982.1 ENST00000561813.5 H3BR56 ENST00000610499.2 [Q96MC5-2] ENST00000615273.4 [Q96MC5-1] |