BDH1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	6 studies	28% ± 5%	Explore
hepatocyte	5 studies	50% ± 25%	Explore
ciliated cell	4 studies	25% ± 6%	Explore
GABAergic neuron	4 studies	37% ± 18%	Explore
glutamatergic neuron	4 studies	38% ± 20%	Explore
endothelial cell	3 studies	21% ± 3%	Explore
goblet cell	3 studies	19% ± 1%	Explore
intestinal crypt stem cell	3 studies	17% ± 2%	Explore
astrocyte	3 studies	30% ± 8%	Explore
interneuron	3 studies	46% ± 24%	Explore
oligodendrocyte precursor cell	3 studies	32% ± 10%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	27% ± 12%	Explore
liver	4 studies	27% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	99%	2176.21	648 / 653	96%	8.81	583 / 605
prostate	96%	1992.27	234 / 245	100%	17.25	500 / 502
liver	99%	13552.41	224 / 226	92%	34.25	373 / 406
stomach	91%	1357.36	325 / 359	94%	15.59	269 / 286
esophagus	85%	2179.87	1226 / 1445	97%	14.67	178 / 183
skin	96%	2629.19	1743 / 1809	79%	7.24	375 / 472
ovary	79%	705.27	142 / 180	95%	11.61	408 / 430
breast	78%	943.67	360 / 459	95%	10.62	1058 / 1118
brain	99%	3248.16	2621 / 2642	72%	5.11	507 / 705
intestine	70%	2850.66	678 / 966	98%	19.54	514 / 527
bladder	67%	853.14	14 / 21	92%	13.15	463 / 504
kidney	100%	1655.13	89 / 89	48%	4.65	432 / 901
uterus	56%	475.65	96 / 170	87%	11.90	400 / 459
adrenal gland	66%	488.08	171 / 258	66%	4.28	152 / 230
lung	44%	430.86	254 / 578	88%	10.32	1019 / 1155
pancreas	40%	254.42	131 / 328	85%	6.46	152 / 178
lymph node	0%	0	0 / 0	100%	9.08	29 / 29
tonsil	0%	0	0 / 0	100%	16.39	45 / 45
ureter	0%	0	0 / 0	100%	4.11	1 / 1
spleen	93%	825.58	223 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	89%	6.80	71 / 80
heart	86%	2051.90	744 / 861	0%	0	0 / 0
muscle	66%	795.03	527 / 803	0%	0	0 / 0
adipose	49%	572.93	584 / 1204	0%	0	0 / 0
peripheral blood	39%	584.34	359 / 929	0%	0	0 / 0
blood vessel	12%	80.26	156 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0