B3GNT3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of B3GNT3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	87%	240.34	284 / 328	94%	131.42	168 / 178
stomach	81%	2720.55	289 / 359	97%	158.49	276 / 286
intestine	57%	1738.19	547 / 966	98%	173.86	517 / 527
bladder	57%	796.43	12 / 21	88%	108.22	442 / 504
kidney	79%	399.83	70 / 89	39%	14.49	350 / 901
esophagus	42%	770.20	600 / 1445	69%	95.14	127 / 183
ureter	0%	0	0 / 0	100%	63.97	1 / 1
lung	21%	44.89	122 / 578	69%	48.99	793 / 1155
liver	42%	136.68	94 / 226	34%	27.02	138 / 406
breast	58%	243.75	267 / 459	16%	5.84	178 / 1118
ovary	2%	2.07	4 / 180	68%	35.44	291 / 430
prostate	61%	244.26	149 / 245	7%	2.04	37 / 502
thymus	11%	17.77	74 / 653	54%	45.69	329 / 605
uterus	6%	16.95	10 / 170	59%	47.80	270 / 459
skin	61%	184.09	1107 / 1809	1%	0.22	5 / 472
tonsil	0%	0	0 / 0	36%	16.07	16 / 45
adipose	5%	7.17	64 / 1204	0%	0	0 / 0
spleen	2%	2.16	5 / 241	0%	0	0 / 0
adrenal gland	0%	0.78	1 / 258	1%	0.20	2 / 230
blood vessel	1%	1.28	16 / 1335	0%	0	0 / 0
muscle	0%	0.41	2 / 803	0%	0	0 / 0
peripheral blood	0%	1.27	2 / 929	0%	0	0 / 0
heart	0%	0.13	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
brain	0%	0	0 / 2642	0%	0	0 / 705
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0016266	Biological process	O-glycan processing
GO_0030311	Biological process	poly-N-acetyllactosamine biosynthetic process
GO_0006493	Biological process	protein O-linked glycosylation
GO_0018146	Biological process	keratan sulfate biosynthetic process
GO_0000139	Cellular component	Golgi membrane
GO_0005886	Cellular component	plasma membrane
GO_0008499	Molecular function	UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO_0047223	Molecular function	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity
GO_0008532	Molecular function	N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity

Gene name	B3GNT3
Protein name	N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 (EC 2.4.1.149) (Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase) (EC 2.4.1.146) (Beta-1,3-galactosyltransferase 8) (Beta-1,3-GalTase 8) (Beta3Gal-T8) (Beta3GalT8) (b3Gal-T8) (Beta-3-Gx-T8) (Core 1 extending beta-1,3-N-acetylglucosaminyltransferase) (Core1-beta3GlcNAcT) (Transmembrane protein 3) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 8) (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3) (BGnT-3) (Beta-1,3-Gn-T3) (Beta-1,3-N-acetylglucosaminyltransferase 3) (Beta3Gn-T3) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 8) Hexosyltransferase (EC 2.4.1.-) UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
Synonyms	TMEM3 UNQ637/PRO1266 B3GALT8
Description	FUNCTION: Beta-1,3-N-acetylglucosaminyltransferase involved in the synthesis of poly-N-acetyllactosamine. Has activity for type 2 oligosaccharides . Also acts as a core1-1,3-N-acetylglucosaminyltransferase (Core1-beta3GlcNAcT) to form the 6-sulfo sialyl Lewis x on extended core1 O-glycans . .
Accessions	ENST00000599265.5 Q9Y2A9 ENST00000600777.1 ENST00000595387.1 M0QX58 M0R199 ENST00000318683.7

B3GNT3 report