Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 4 studies | 23% ± 5% | |
epithelial cell | 3 studies | 19% ± 3% | |
GABAergic neuron | 3 studies | 42% ± 14% | |
glutamatergic neuron | 3 studies | 47% ± 16% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 8% | |
oligodendrocyte | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 615.75 | 2640 / 2642 | 100% | 14.57 | 705 / 705 |
esophagus | 100% | 414.03 | 1443 / 1445 | 100% | 10.90 | 183 / 183 |
bladder | 100% | 503.43 | 21 / 21 | 100% | 14.41 | 503 / 504 |
breast | 100% | 463.34 | 458 / 459 | 100% | 17.77 | 1117 / 1118 |
stomach | 100% | 408.43 | 359 / 359 | 100% | 12.17 | 285 / 286 |
prostate | 100% | 588.51 | 245 / 245 | 100% | 17.03 | 500 / 502 |
ovary | 100% | 483.69 | 180 / 180 | 100% | 10.11 | 428 / 430 |
thymus | 100% | 668.52 | 653 / 653 | 99% | 12.62 | 600 / 605 |
intestine | 100% | 461.74 | 965 / 966 | 99% | 12.54 | 523 / 527 |
uterus | 100% | 517.07 | 170 / 170 | 99% | 13.45 | 455 / 459 |
liver | 100% | 381.64 | 226 / 226 | 98% | 9.50 | 399 / 406 |
kidney | 100% | 463.20 | 89 / 89 | 98% | 10.24 | 885 / 901 |
adrenal gland | 100% | 828.22 | 258 / 258 | 98% | 14.00 | 225 / 230 |
pancreas | 98% | 243.79 | 323 / 328 | 99% | 9.39 | 176 / 178 |
lung | 97% | 353.47 | 562 / 578 | 100% | 15.90 | 1152 / 1155 |
skin | 99% | 432.27 | 1782 / 1809 | 97% | 10.41 | 457 / 472 |
adipose | 100% | 467.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.49 | 29 / 29 |
spleen | 100% | 348.18 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.11 | 1 / 1 |
blood vessel | 99% | 408.30 | 1324 / 1335 | 0% | 0 | 0 / 0 |
muscle | 97% | 267.31 | 777 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 353.02 | 832 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 8.24 | 68 / 80 |
peripheral blood | 64% | 218.68 | 599 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1904058 | Biological process | positive regulation of sensory perception of pain |
GO_1905706 | Biological process | regulation of mitochondrial ATP synthesis coupled proton transport |
GO_1905273 | Biological process | positive regulation of proton-transporting ATP synthase activity, rotational mechanism |
GO_0018023 | Biological process | peptidyl-lysine trimethylation |
GO_0006338 | Biological process | chromatin remodeling |
GO_0018022 | Biological process | peptidyl-lysine methylation |
GO_0030061 | Cellular component | mitochondrial crista |
GO_0005739 | Cellular component | mitochondrion |
GO_0042054 | Molecular function | histone methyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0016279 | Molecular function | protein-lysine N-methyltransferase activity |
Gene name | ATPSCKMT |
Protein name | ATP synthase subunit C lysine N-methyltransferase (EC 2.1.1.-) (Protein N-lysine methyltransferase FAM173B) (hFAM173B) ATP synthase c subunit lysine N-methyltransferase |
Synonyms | LOC134145 hCG_36858 FAM173B |
Description | FUNCTION: Mitochondrial protein-lysine N-methyltransferase that trimethylates ATP synthase subunit C, ATP5MC1 and ATP5MC2. Trimethylation is required for proper incorporation of the C subunit into the ATP synthase complex and mitochondrial respiration . Promotes chronic pain . Involved in persistent inflammatory and neuropathic pain: methyltransferase activity in the mitochondria of sensory neurons promotes chronic pain via a pathway that depends on the production of reactive oxygen species (ROS) and on the engagement of spinal cord microglia . . |
Accessions | J3KN90 ENST00000280330.12 ENST00000504390.5 D6RBE3 D6RIE0 ENST00000511437.6 [Q6P4H8-1] ENST00000510047.5 [Q6P4H8-2] ENST00000506108.2 Q6P4H8 |