Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 53% ± 26% | |
oligodendrocyte precursor cell | 13 studies | 50% ± 21% | |
type I pneumocyte | 10 studies | 49% ± 24% | |
type II pneumocyte | 5 studies | 49% ± 9% | |
GABAergic neuron | 4 studies | 22% ± 7% | |
club cell | 4 studies | 48% ± 14% | |
ciliated cell | 4 studies | 31% ± 13% | |
epithelial cell | 3 studies | 25% ± 6% | |
oligodendrocyte | 3 studies | 24% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 7132.55 | 653 / 653 | 84% | 88.08 | 511 / 605 |
brain | 88% | 1049.65 | 2316 / 2642 | 97% | 28.47 | 682 / 705 |
lung | 98% | 3118.00 | 568 / 578 | 59% | 14.88 | 686 / 1155 |
pancreas | 78% | 365.25 | 256 / 328 | 38% | 2.85 | 68 / 178 |
stomach | 72% | 787.60 | 257 / 359 | 15% | 1.26 | 42 / 286 |
esophagus | 38% | 934.31 | 551 / 1445 | 42% | 4.59 | 77 / 183 |
skin | 72% | 1437.66 | 1305 / 1809 | 2% | 0.11 | 8 / 472 |
tonsil | 0% | 0 | 0 / 0 | 53% | 8.70 | 24 / 45 |
breast | 24% | 166.23 | 108 / 459 | 28% | 3.32 | 311 / 1118 |
intestine | 18% | 95.60 | 177 / 966 | 11% | 0.83 | 58 / 527 |
uterus | 2% | 25.54 | 3 / 170 | 20% | 2.35 | 91 / 459 |
kidney | 1% | 4.00 | 1 / 89 | 17% | 1.11 | 151 / 901 |
bladder | 0% | 0 | 0 / 21 | 8% | 1.43 | 40 / 504 |
liver | 0% | 0 | 0 / 226 | 4% | 0.45 | 17 / 406 |
ovary | 1% | 3.82 | 1 / 180 | 3% | 0.23 | 15 / 430 |
muscle | 2% | 13.88 | 19 / 803 | 0% | 0 | 0 / 0 |
adipose | 1% | 5.52 | 12 / 1204 | 0% | 0 | 0 / 0 |
prostate | 0% | 1.51 | 1 / 245 | 0% | 0.03 | 1 / 502 |
peripheral blood | 0% | 0.62 | 2 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 1.03 | 2 / 1335 | 0% | 0 | 0 / 0 |
heart | 0% | 0.70 | 1 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034220 | Biological process | monoatomic ion transmembrane transport |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_1902047 | Biological process | polyamine transmembrane transport |
GO_0031901 | Cellular component | early endosome membrane |
GO_0031902 | Cellular component | late endosome membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0015662 | Molecular function | P-type ion transporter activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0019829 | Molecular function | ATPase-coupled monoatomic cation transmembrane transporter activity |
GO_0015203 | Molecular function | polyamine transmembrane transporter activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | ATP13A4 |
Protein name | Cation-transporting ATPase (EC 7.2.2.-) Probable cation-transporting ATPase 13A4 (EC 7.2.2.-) (P5-ATPase isoform 4) ATPase 13A4 |
Synonyms | UNQ3052/PRO9871 |
Description | |
Accessions | H7C1P5 ENST00000428352.5 ENST00000450950.6 H0Y4Z2 ENST00000437904.1 ENST00000342695.9 [Q4VNC1-1] ENST00000295548.3 [Q4VNC1-3] ENST00000400270.6 [Q4VNC1-4] Q4VNC1 ENST00000392443.7 F8W9W3 B7WPN9 |