Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 26% ± 8% | |
neuron | 3 studies | 21% ± 2% | |
GABAergic neuron | 3 studies | 25% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4363.38 | 2642 / 2642 | 100% | 48.52 | 705 / 705 |
breast | 100% | 3495.00 | 459 / 459 | 100% | 46.30 | 1118 / 1118 |
esophagus | 100% | 3376.27 | 1445 / 1445 | 100% | 39.50 | 183 / 183 |
ovary | 100% | 2809.92 | 180 / 180 | 100% | 24.37 | 430 / 430 |
prostate | 100% | 4189.59 | 245 / 245 | 100% | 48.15 | 502 / 502 |
stomach | 100% | 2490.22 | 359 / 359 | 100% | 28.65 | 286 / 286 |
thymus | 100% | 3408.67 | 653 / 653 | 100% | 38.55 | 605 / 605 |
intestine | 100% | 2980.66 | 966 / 966 | 100% | 28.16 | 526 / 527 |
uterus | 100% | 2938.21 | 170 / 170 | 100% | 34.85 | 458 / 459 |
kidney | 100% | 2514.69 | 89 / 89 | 100% | 32.27 | 898 / 901 |
bladder | 100% | 3641.48 | 21 / 21 | 100% | 33.57 | 502 / 504 |
pancreas | 99% | 1987.75 | 326 / 328 | 100% | 28.17 | 178 / 178 |
lung | 99% | 2333.69 | 573 / 578 | 100% | 36.16 | 1155 / 1155 |
adrenal gland | 100% | 3239.07 | 258 / 258 | 99% | 38.47 | 227 / 230 |
skin | 100% | 4133.34 | 1809 / 1809 | 97% | 34.58 | 460 / 472 |
liver | 100% | 1761.21 | 226 / 226 | 97% | 15.35 | 392 / 406 |
adipose | 100% | 3393.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.08 | 29 / 29 |
spleen | 100% | 2511.26 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.61 | 1 / 1 |
blood vessel | 100% | 2966.70 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2998.25 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1936.95 | 851 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 23.44 | 75 / 80 |
peripheral blood | 61% | 1074.96 | 567 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1902857 | Biological process | positive regulation of non-motile cilium assembly |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0006974 | Biological process | DNA damage response |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0044458 | Biological process | motile cilium assembly |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016604 | Cellular component | nuclear body |
GO_0005634 | Cellular component | nucleus |
GO_0070840 | Molecular function | dynein complex binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | ATMIN |
Protein name | ATM interactor (ATM/ATR-substrate CHK2-interacting zinc finger protein) (ASCIZ) (Zinc finger protein 822) ATM interactor |
Synonyms | KIAA0431 ZNF822 |
Description | FUNCTION: Transcription factor. Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM. Binds to the DYNLL1 promoter and activates its transcription. . |
Accessions | ENST00000709341.1 [O43313-2] J3QRX7 ENST00000564241.5 [O43313-2] ENST00000299575.5 [O43313-1] ENST00000565237.1 ENST00000709339.1 [O43313-2] O43313 ENST00000566488.1 [O43313-2] ENST00000709336.1 [O43313-1] |