Insufficient scRNA-seq data for expression of APOF at single-cell level.
Insufficient scRNA-seq data for expression of APOF at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 11554.44 | 226 / 226 | 88% | 88.51 | 357 / 406 |
prostate | 88% | 25.91 | 215 / 245 | 93% | 18.57 | 467 / 502 |
breast | 56% | 3.36 | 256 / 459 | 32% | 1.39 | 359 / 1118 |
spleen | 83% | 20.10 | 199 / 241 | 0% | 0 | 0 / 0 |
kidney | 62% | 2.88 | 55 / 89 | 1% | 0.12 | 5 / 901 |
peripheral blood | 60% | 7.38 | 557 / 929 | 0% | 0 | 0 / 0 |
thymus | 58% | 2.45 | 377 / 653 | 0% | 0 | 0 / 605 |
brain | 56% | 2.59 | 1483 / 2642 | 0% | 0.00 | 2 / 705 |
pancreas | 54% | 1.97 | 178 / 328 | 2% | 0.09 | 3 / 178 |
stomach | 52% | 1.93 | 186 / 359 | 2% | 0.10 | 7 / 286 |
adrenal gland | 53% | 2.20 | 136 / 258 | 0% | 0 | 0 / 230 |
intestine | 43% | 1.98 | 420 / 966 | 1% | 0.47 | 7 / 527 |
lung | 42% | 1.46 | 242 / 578 | 2% | 0.09 | 21 / 1155 |
adipose | 42% | 2.90 | 502 / 1204 | 0% | 0 | 0 / 0 |
bladder | 38% | 1.14 | 8 / 21 | 1% | 0.04 | 5 / 504 |
esophagus | 36% | 1.50 | 522 / 1445 | 2% | 0.05 | 4 / 183 |
uterus | 36% | 1.40 | 62 / 170 | 1% | 0.02 | 3 / 459 |
heart | 37% | 1.57 | 316 / 861 | 0% | 0 | 0 / 0 |
ovary | 37% | 1.21 | 66 / 180 | 0% | 0 | 0 / 430 |
skin | 30% | 1.36 | 546 / 1809 | 0% | 0.01 | 1 / 472 |
blood vessel | 30% | 1.16 | 400 / 1335 | 0% | 0 | 0 / 0 |
muscle | 28% | 0.96 | 221 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.07 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008203 | Biological process | cholesterol metabolic process |
GO_0006629 | Biological process | lipid metabolic process |
GO_0006869 | Biological process | lipid transport |
GO_0005615 | Cellular component | extracellular space |
GO_0034362 | Cellular component | low-density lipoprotein particle |
GO_0034364 | Cellular component | high-density lipoprotein particle |
GO_0005319 | Molecular function | lipid transporter activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0015485 | Molecular function | cholesterol binding |
Gene name | APOF |
Protein name | Apolipoprotein F (Apo-F) (Lipid transfer inhibitor protein) (LTIP) |
Synonyms | |
Description | FUNCTION: Minor apolipoprotein that associates with LDL. Inhibits cholesteryl ester transfer protein (CETP) activity and appears to be an important regulator of cholesterol transport. Also associates to a lesser degree with VLDL, Apo-AI and Apo-AII. . |
Accessions | Q13790 ENST00000398189.4 |