Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 20% ± 3% | |
glutamatergic neuron | 3 studies | 26% ± 6% |
Insufficient scRNA-seq data for expression of AP4B1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 1056.08 | 359 / 359 | 100% | 8.67 | 286 / 286 |
uterus | 100% | 1582.19 | 170 / 170 | 100% | 9.54 | 459 / 459 |
brain | 100% | 1466.75 | 2637 / 2642 | 100% | 9.08 | 705 / 705 |
intestine | 100% | 1485.95 | 966 / 966 | 100% | 9.36 | 526 / 527 |
bladder | 100% | 1141.33 | 21 / 21 | 100% | 7.91 | 503 / 504 |
lung | 100% | 1303.82 | 577 / 578 | 100% | 7.38 | 1153 / 1155 |
breast | 100% | 1148.63 | 459 / 459 | 100% | 7.50 | 1114 / 1118 |
prostate | 100% | 1310.70 | 245 / 245 | 100% | 6.16 | 500 / 502 |
esophagus | 100% | 1105.31 | 1445 / 1445 | 99% | 7.06 | 182 / 183 |
pancreas | 100% | 1105.41 | 328 / 328 | 99% | 10.65 | 177 / 178 |
thymus | 100% | 1619.60 | 653 / 653 | 99% | 8.36 | 601 / 605 |
ovary | 100% | 1712.42 | 180 / 180 | 99% | 6.95 | 427 / 430 |
skin | 100% | 1034.43 | 1808 / 1809 | 99% | 7.49 | 466 / 472 |
adrenal gland | 100% | 1052.67 | 258 / 258 | 95% | 5.03 | 218 / 230 |
kidney | 100% | 1083.38 | 89 / 89 | 93% | 4.92 | 835 / 901 |
liver | 100% | 604.19 | 225 / 226 | 93% | 4.24 | 376 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.79 | 29 / 29 |
spleen | 100% | 2900.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.33 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.47 | 1 / 1 |
adipose | 100% | 1122.52 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 916.75 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 811.03 | 858 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1347.87 | 915 / 929 | 0% | 0 | 0 / 0 |
muscle | 98% | 576.01 | 788 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 71% | 3.02 | 57 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008104 | Biological process | protein localization |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0006886 | Biological process | intracellular protein transport |
GO_0061938 | Biological process | protein localization to somatodendritic compartment |
GO_0006605 | Biological process | protein targeting |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0030124 | Cellular component | AP-4 adaptor complex |
GO_0030131 | Cellular component | clathrin adaptor complex |
GO_0005829 | Cellular component | cytosol |
GO_0098541 | Cellular component | cytoplasmic side of trans-Golgi network transport vesicle membrane |
GO_0031904 | Cellular component | endosome lumen |
GO_0030276 | Molecular function | clathrin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AP4B1 |
Protein name | AP complex subunit beta AP-4 complex subunit beta-1 (AP-4 adaptor complex subunit beta) (Adaptor-related protein complex 4 subunit beta-1) (Beta subunit of AP-4) (Beta4-adaptin) Adaptor related protein complex 4 subunit beta 1 |
Synonyms | |
Description | FUNCTION: Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways . AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asymmetric localization of somatodendritic proteins in neurons. AP-4 is involved in the recognition and binding of tyrosine-based sorting signals found in the cytoplasmic part of cargos, but may also recognize other types of sorting signal (Probable). . |
Accessions | ENST00000369564.5 ENST00000256658.8 [Q9Y6B7-1] B1ALD2 ENST00000432415.5 ENST00000369569.6 [Q9Y6B7-1] ENST00000369571.2 ENST00000369567.5 B1ALD0 B1ALD1 B1ALD3 Q9Y6B7 |