Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 25% ± 5% | |
epithelial cell | 3 studies | 26% ± 4% | |
ciliated cell | 3 studies | 17% ± 1% | |
GABAergic neuron | 3 studies | 21% ± 3% | |
glutamatergic neuron | 3 studies | 30% ± 6% | |
oligodendrocyte | 3 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 8739.26 | 2642 / 2642 | 100% | 63.47 | 705 / 705 |
lung | 100% | 2983.40 | 576 / 578 | 100% | 32.33 | 1151 / 1155 |
esophagus | 99% | 3099.46 | 1434 / 1445 | 100% | 35.46 | 183 / 183 |
breast | 100% | 3863.94 | 459 / 459 | 99% | 39.39 | 1109 / 1118 |
ovary | 100% | 2531.80 | 180 / 180 | 99% | 22.51 | 426 / 430 |
intestine | 100% | 3467.80 | 966 / 966 | 99% | 23.65 | 520 / 527 |
uterus | 100% | 3476.25 | 170 / 170 | 98% | 22.92 | 450 / 459 |
bladder | 100% | 3637.76 | 21 / 21 | 98% | 23.76 | 494 / 504 |
prostate | 100% | 2528.29 | 244 / 245 | 98% | 24.96 | 494 / 502 |
stomach | 98% | 2247.92 | 353 / 359 | 99% | 26.83 | 284 / 286 |
skin | 100% | 2417.72 | 1800 / 1809 | 98% | 41.83 | 463 / 472 |
thymus | 100% | 2512.28 | 651 / 653 | 97% | 22.42 | 589 / 605 |
kidney | 99% | 1964.69 | 88 / 89 | 97% | 29.91 | 878 / 901 |
pancreas | 96% | 1487.47 | 314 / 328 | 99% | 24.42 | 176 / 178 |
adrenal gland | 100% | 2539.53 | 257 / 258 | 91% | 18.47 | 209 / 230 |
liver | 83% | 1013.06 | 187 / 226 | 88% | 14.30 | 358 / 406 |
adipose | 100% | 4591.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3745.02 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 7988.20 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2165.46 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.97 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 98% | 27.01 | 78 / 80 |
tonsil | 0% | 0 | 0 / 0 | 96% | 20.24 | 43 / 45 |
heart | 94% | 2364.62 | 811 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 79% | 15.75 | 23 / 29 |
peripheral blood | 24% | 453.06 | 223 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0005575 | Cellular component | cellular_component |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | ANKRD40 |
Protein name | Ankyrin repeat domain 40 Ankyrin repeat domain-containing protein 40 Ankyrin repeat domain 40 (cDNA, FLJ94665) |
Synonyms | hCG_29645 |
Description | |
Accessions | A8IK34 Q6AI12 ENST00000513072.1 K7ERW4 ENST00000285243.7 |