Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 4 studies | 19% ± 1% | |
epithelial cell | 4 studies | 28% ± 3% | |
ciliated cell | 3 studies | 21% ± 4% | |
GABAergic neuron | 3 studies | 21% ± 4% | |
glutamatergic neuron | 3 studies | 25% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 4% | |
basal cell | 3 studies | 25% ± 3% | |
oligodendrocyte | 3 studies | 18% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1339.02 | 245 / 245 | 100% | 27.21 | 500 / 502 |
adrenal gland | 100% | 1168.38 | 258 / 258 | 100% | 23.74 | 229 / 230 |
esophagus | 100% | 896.84 | 1445 / 1445 | 99% | 13.70 | 182 / 183 |
intestine | 100% | 1053.20 | 966 / 966 | 99% | 16.65 | 524 / 527 |
lung | 99% | 1015.58 | 575 / 578 | 100% | 17.99 | 1154 / 1155 |
thymus | 100% | 1510.92 | 653 / 653 | 99% | 26.33 | 601 / 605 |
stomach | 100% | 926.89 | 359 / 359 | 99% | 15.08 | 284 / 286 |
breast | 100% | 1224.04 | 459 / 459 | 99% | 21.98 | 1108 / 1118 |
brain | 99% | 681.57 | 2617 / 2642 | 100% | 24.02 | 704 / 705 |
bladder | 100% | 974.14 | 21 / 21 | 99% | 16.22 | 498 / 504 |
ovary | 100% | 1647.99 | 180 / 180 | 99% | 12.34 | 424 / 430 |
uterus | 100% | 1485.64 | 170 / 170 | 98% | 16.39 | 450 / 459 |
pancreas | 99% | 590.95 | 326 / 328 | 98% | 16.69 | 175 / 178 |
kidney | 100% | 553.75 | 89 / 89 | 97% | 14.86 | 877 / 901 |
liver | 100% | 470.00 | 226 / 226 | 95% | 12.01 | 387 / 406 |
skin | 100% | 949.64 | 1809 / 1809 | 92% | 13.20 | 432 / 472 |
adipose | 100% | 954.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 946.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.75 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.22 | 1 / 1 |
blood vessel | 100% | 1008.17 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 474.47 | 792 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 11.30 | 28 / 29 |
heart | 95% | 506.36 | 818 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 13.07 | 65 / 80 |
peripheral blood | 66% | 434.45 | 617 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043254 | Biological process | regulation of protein-containing complex assembly |
GO_0010468 | Biological process | regulation of gene expression |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_1990393 | Cellular component | 3M complex |
GO_0016020 | Cellular component | membrane |
GO_0005634 | Cellular component | nucleus |
GO_0050750 | Molecular function | low-density lipoprotein particle receptor binding |
GO_0019901 | Molecular function | protein kinase binding |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0005515 | Molecular function | protein binding |
GO_0042826 | Molecular function | histone deacetylase binding |
Gene name | ANKRA2 |
Protein name | Ankyrin repeat family A protein 2 (RFXANK-like protein 2) Ankyrin repeat family A member 2 |
Synonyms | ANKRA |
Description | FUNCTION: May regulate the interaction between the 3M complex and the histone deacetylases HDAC4 and HDAC5 . May also regulate LRP2/megalin (By similarity). . |
Accessions | ENST00000504641.1 ENST00000296785.8 Q9H9E1 D6RBK8 |