Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 26% ± 8% | |
endothelial cell | 4 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 30% ± 8% | |
glutamatergic neuron | 3 studies | 40% ± 14% | |
dendritic cell | 3 studies | 17% ± 1% | |
basal cell | 3 studies | 22% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 3559.52 | 21 / 21 | 100% | 29.98 | 504 / 504 |
breast | 100% | 2703.22 | 459 / 459 | 100% | 29.38 | 1118 / 1118 |
esophagus | 100% | 4050.27 | 1445 / 1445 | 100% | 25.49 | 183 / 183 |
intestine | 100% | 2995.24 | 966 / 966 | 100% | 25.73 | 527 / 527 |
lung | 100% | 2627.98 | 578 / 578 | 100% | 27.86 | 1155 / 1155 |
ovary | 100% | 2851.37 | 180 / 180 | 100% | 25.20 | 430 / 430 |
prostate | 100% | 4171.86 | 245 / 245 | 100% | 24.64 | 502 / 502 |
skin | 100% | 3253.99 | 1809 / 1809 | 100% | 25.43 | 472 / 472 |
uterus | 100% | 3629.64 | 170 / 170 | 100% | 36.08 | 459 / 459 |
thymus | 100% | 3168.64 | 653 / 653 | 100% | 23.93 | 604 / 605 |
brain | 100% | 2960.17 | 2637 / 2642 | 100% | 29.72 | 705 / 705 |
kidney | 100% | 2284.87 | 89 / 89 | 100% | 18.49 | 899 / 901 |
stomach | 100% | 2175.07 | 359 / 359 | 100% | 21.86 | 285 / 286 |
adrenal gland | 100% | 2998.18 | 258 / 258 | 100% | 20.49 | 229 / 230 |
liver | 100% | 1557.36 | 226 / 226 | 99% | 15.73 | 403 / 406 |
pancreas | 100% | 1547.77 | 327 / 328 | 99% | 19.85 | 177 / 178 |
adipose | 100% | 2498.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.62 | 29 / 29 |
muscle | 100% | 2559.96 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3816.01 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.51 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 31.39 | 1 / 1 |
blood vessel | 100% | 2635.48 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1998.45 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 20.01 | 78 / 80 |
peripheral blood | 88% | 1710.69 | 818 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007420 | Biological process | brain development |
GO_0016567 | Biological process | protein ubiquitination |
GO_0031145 | Biological process | anaphase-promoting complex-dependent catabolic process |
GO_0070936 | Biological process | protein K48-linked ubiquitination |
GO_0070979 | Biological process | protein K11-linked ubiquitination |
GO_0051301 | Biological process | cell division |
GO_0051445 | Biological process | regulation of meiotic cell cycle |
GO_0007346 | Biological process | regulation of mitotic cell cycle |
GO_0045842 | Biological process | positive regulation of mitotic metaphase/anaphase transition |
GO_0000792 | Cellular component | heterochromatin |
GO_0005680 | Cellular component | anaphase-promoting complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005819 | Cellular component | spindle |
GO_0005634 | Cellular component | nucleus |
GO_0140767 | Molecular function | enzyme-substrate adaptor activity |
GO_0019903 | Molecular function | protein phosphatase binding |
Gene name | ANAPC7 |
Protein name | Anaphase promoting complex subunit 7 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7) ANAPC7 protein |
Synonyms | APC7 |
Description | FUNCTION: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains . APC7 is not required for the assembly of the APC/C complex, but has an enzyme-substrate adapter activity mediating the processive ubiquitination of specific substrates . Involved in brain development through the specific ubiquitination and clearance of MKI67 from constitutive heterochromatin after neuronal progenitors exit mitosis . . |
Accessions | ENST00000552170.2 Q9UJX3 A5D8X2 Q4KMX6 Q2M2R1 H0YIX7 ENST00000450008.3 [Q9UJX3-2] H0YIW2 ENST00000455511.9 [Q9UJX3-1] ENST00000552087.1 A8KAQ7 |