Insufficient scRNA-seq data for expression of AIRIM at single-cell level.
Insufficient scRNA-seq data for expression of AIRIM at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 822.84 | 1445 / 1445 | 100% | 15.27 | 183 / 183 |
ovary | 100% | 1054.44 | 180 / 180 | 100% | 20.22 | 430 / 430 |
intestine | 100% | 798.14 | 966 / 966 | 100% | 13.70 | 525 / 527 |
lung | 99% | 669.10 | 575 / 578 | 100% | 14.38 | 1155 / 1155 |
breast | 100% | 1082.64 | 459 / 459 | 99% | 16.30 | 1112 / 1118 |
stomach | 100% | 680.66 | 358 / 359 | 100% | 13.39 | 285 / 286 |
brain | 100% | 686.32 | 2630 / 2642 | 100% | 17.19 | 702 / 705 |
bladder | 100% | 870.48 | 21 / 21 | 98% | 14.06 | 495 / 504 |
prostate | 100% | 891.18 | 245 / 245 | 98% | 15.76 | 492 / 502 |
thymus | 100% | 880.26 | 653 / 653 | 98% | 10.88 | 590 / 605 |
uterus | 100% | 1039.46 | 170 / 170 | 97% | 13.92 | 447 / 459 |
pancreas | 100% | 535.57 | 328 / 328 | 97% | 9.38 | 172 / 178 |
skin | 100% | 1106.64 | 1809 / 1809 | 96% | 15.24 | 452 / 472 |
kidney | 100% | 666.79 | 89 / 89 | 95% | 9.04 | 857 / 901 |
adrenal gland | 100% | 904.10 | 258 / 258 | 92% | 9.81 | 211 / 230 |
liver | 100% | 400.13 | 226 / 226 | 84% | 5.93 | 340 / 406 |
adipose | 100% | 987.05 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 843.17 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 789.07 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.87 | 1 / 1 |
muscle | 100% | 592.24 | 802 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 13.15 | 44 / 45 |
heart | 96% | 412.72 | 824 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 6.63 | 64 / 80 |
lymph node | 0% | 0 | 0 / 0 | 76% | 8.44 | 22 / 29 |
peripheral blood | 61% | 394.35 | 566 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042273 | Biological process | ribosomal large subunit biogenesis |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | AIRIM |
Protein name | Chromosome 1 open reading frame 109 AFG2-interacting ribosome maturation factor (Ribosome biogenesis protein C1orf109) Uncharacterized protein C1orf109 |
Synonyms | C1orf109 |
Description | FUNCTION: Involved in the cytoplasmic maturation steps of pre-60S ribosomal particles by promoting the release of shuttling protein RSL24D1/RLP24 from the pre-ribosomal particles . Acts together with AFG2A, AFG2B and CINP . . |
Accessions | V9GYI2 Q9NX04 ENST00000619962.1 V9GYT8 ENST00000488137.5 ENST00000486637 ENST00000491981.5 V9GYQ8 ENST00000464085.5 [Q9NX04-1] A0A087WUX7 V9GY35 ENST00000461359.5 ENST00000494120.1 [Q9NX04-2] ENST00000477060.1 V9GYN4 ENST00000358011.8 [Q9NX04-1] ENST00000486637.2 [Q9NX04-1] |