Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 40% ± 23% | |
endothelial cell | 8 studies | 30% ± 11% | |
macrophage | 8 studies | 23% ± 5% | |
oligodendrocyte | 7 studies | 22% ± 7% | |
myeloid cell | 6 studies | 21% ± 5% | |
interneuron | 5 studies | 34% ± 18% | |
neuron | 5 studies | 25% ± 8% | |
epithelial cell | 5 studies | 22% ± 5% | |
type I pneumocyte | 5 studies | 19% ± 3% | |
GABAergic neuron | 5 studies | 42% ± 20% | |
astrocyte | 4 studies | 21% ± 4% | |
granule cell | 3 studies | 19% ± 1% | |
retinal pigment epithelial cell | 3 studies | 29% ± 11% | |
ciliated cell | 3 studies | 19% ± 2% | |
basal cell | 3 studies | 23% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 6% | |
abnormal cell | 3 studies | 20% ± 3% | |
endothelial cell of lymphatic vessel | 3 studies | 25% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 30% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 9343.35 | 170 / 170 | 100% | 27.38 | 459 / 459 |
brain | 100% | 17721.00 | 2641 / 2642 | 100% | 47.98 | 705 / 705 |
skin | 100% | 7086.90 | 1808 / 1809 | 100% | 58.82 | 472 / 472 |
prostate | 100% | 8684.50 | 245 / 245 | 100% | 30.99 | 501 / 502 |
pancreas | 100% | 3770.45 | 327 / 328 | 100% | 29.05 | 178 / 178 |
stomach | 100% | 4192.33 | 359 / 359 | 100% | 21.42 | 285 / 286 |
ovary | 100% | 8695.43 | 180 / 180 | 100% | 26.00 | 428 / 430 |
esophagus | 100% | 6173.39 | 1445 / 1445 | 99% | 21.97 | 182 / 183 |
intestine | 100% | 5740.72 | 965 / 966 | 99% | 24.85 | 524 / 527 |
thymus | 100% | 6756.27 | 653 / 653 | 99% | 21.71 | 600 / 605 |
adrenal gland | 100% | 4534.43 | 258 / 258 | 99% | 38.17 | 228 / 230 |
breast | 100% | 6457.58 | 459 / 459 | 99% | 22.96 | 1108 / 1118 |
bladder | 100% | 6908.62 | 21 / 21 | 99% | 33.97 | 499 / 504 |
lung | 100% | 9329.64 | 577 / 578 | 99% | 24.08 | 1144 / 1155 |
liver | 98% | 3215.20 | 221 / 226 | 100% | 16.35 | 404 / 406 |
kidney | 100% | 3699.45 | 89 / 89 | 97% | 15.25 | 873 / 901 |
eye | 0% | 0 | 0 / 0 | 100% | 26.82 | 80 / 80 |
spleen | 100% | 4761.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.09 | 1 / 1 |
adipose | 100% | 5609.97 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 4335.08 | 1323 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 15.66 | 28 / 29 |
heart | 96% | 3522.56 | 828 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 3188.79 | 760 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 42% | 1100.82 | 392 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034614 | Biological process | cellular response to reactive oxygen species |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0005737 | Cellular component | cytoplasm |
GO_0071944 | Cellular component | cell periphery |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0031593 | Molecular function | polyubiquitin modification-dependent protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005096 | Molecular function | GTPase activator activity |
GO_0003924 | Molecular function | GTPase activity |
Gene name | AGAP3 |
Protein name | Alternative protein AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 (AGAP-3) (CRAM-associated GTPase) (CRAG) (Centaurin-gamma-3) (Cnt-g3) (MR1-interacting protein) (MRIP-1) ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 AGAP3 protein |
Synonyms | CENTG3 |
Description | FUNCTION: GTPase-activating protein for the ADP ribosylation factor family (Potential). GTPase which may be involved in the degradation of expanded polyglutamine proteins through the ubiquitin-proteasome pathway. . |
Accessions | Q96P47 ENST00000461065.1 ENST00000468796.1 H7C4U6 ENST00000469901.5 ENST00000463381.5 [Q96P47-5] H7C5G0 ENST00000335367.7 C9J975 ENST00000467724.5 Q86ST5 ENST00000473312.5 [Q96P47-6] ENST00000397238.7 [Q96P47-4] H0Y873 Q86XV5 L8EB86 ENST00000479901.5 H7C4F1 E7ESL9 |