Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 4 studies | 66% ± 10% | |
endothelial cell | 3 studies | 21% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 33% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 58059.81 | 226 / 226 | 92% | 592.66 | 372 / 406 |
esophagus | 87% | 231.89 | 1256 / 1445 | 16% | 1.82 | 30 / 183 |
breast | 89% | 482.50 | 407 / 459 | 4% | 0.09 | 42 / 1118 |
adipose | 78% | 150.60 | 945 / 1204 | 0% | 0 | 0 / 0 |
intestine | 45% | 34.47 | 435 / 966 | 33% | 4.69 | 172 / 527 |
stomach | 37% | 40.45 | 133 / 359 | 40% | 6.27 | 115 / 286 |
adrenal gland | 71% | 77.77 | 182 / 258 | 5% | 1.81 | 12 / 230 |
blood vessel | 69% | 114.66 | 917 / 1335 | 0% | 0 | 0 / 0 |
kidney | 62% | 62.17 | 55 / 89 | 5% | 2.54 | 44 / 901 |
thymus | 44% | 41.49 | 286 / 653 | 1% | 0.01 | 4 / 605 |
spleen | 41% | 62.32 | 100 / 241 | 0% | 0 | 0 / 0 |
muscle | 41% | 34.82 | 333 / 803 | 0% | 0 | 0 / 0 |
skin | 38% | 39.62 | 696 / 1809 | 2% | 0.18 | 11 / 472 |
pancreas | 6% | 2.41 | 20 / 328 | 34% | 2.46 | 61 / 178 |
lung | 29% | 20.14 | 167 / 578 | 11% | 1.28 | 122 / 1155 |
uterus | 33% | 30.02 | 56 / 170 | 3% | 0.14 | 16 / 459 |
prostate | 34% | 30.39 | 83 / 245 | 2% | 0.07 | 11 / 502 |
bladder | 14% | 4.76 | 3 / 21 | 16% | 0.91 | 83 / 504 |
peripheral blood | 23% | 129.97 | 213 / 929 | 0% | 0 | 0 / 0 |
ovary | 17% | 7.53 | 31 / 180 | 1% | 0.01 | 3 / 430 |
heart | 9% | 6.45 | 75 / 861 | 0% | 0 | 0 / 0 |
brain | 1% | 0.87 | 37 / 2642 | 1% | 0.02 | 8 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0046294 | Biological process | formaldehyde catabolic process |
GO_0046164 | Biological process | alcohol catabolic process |
GO_0006067 | Biological process | ethanol metabolic process |
GO_0006066 | Biological process | alcohol metabolic process |
GO_0010430 | Biological process | fatty acid omega-oxidation |
GO_1901661 | Biological process | quinone metabolic process |
GO_0001523 | Biological process | retinoid metabolic process |
GO_0006081 | Biological process | cellular aldehyde metabolic process |
GO_0042572 | Biological process | retinol metabolic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0003960 | Molecular function | NADPH:quinone reductase activity |
GO_0016620 | Molecular function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
GO_0004032 | Molecular function | aldose reductase (NADPH) activity |
GO_0004024 | Molecular function | alcohol dehydrogenase (NAD+) activity, zinc-dependent |
GO_0051287 | Molecular function | NAD binding |
GO_0019841 | Molecular function | retinol binding |
GO_0019115 | Molecular function | benzaldehyde dehydrogenase [NAD(P)+] activity |
GO_0004022 | Molecular function | alcohol dehydrogenase (NAD+) activity |
GO_0051903 | Molecular function | S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0004745 | Molecular function | all-trans-retinol dehydrogenase (NAD+) activity |
GO_0005503 | Molecular function | all-trans retinal binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ADH4 |
Protein name | Alcohol dehydrogenase 4 (class II), pi polypeptide All-trans-retinol dehydrogenase [NAD(+)] ADH4 (EC 1.1.1.105) (Alcohol dehydrogenase 2) (Alcohol dehydrogenase 4) (Alcohol dehydrogenase class II pi chain) |
Synonyms | ADH2 |
Description | FUNCTION: Catalyzes the NAD-dependent oxidation of either all-trans-retinol or 9-cis-retinol . Also oxidizes long chain omega-hydroxy fatty acids, such as 20-HETE, producing both the intermediate aldehyde, 20-oxoarachidonate and the end product, a dicarboxylic acid, (5Z,8Z,11Z,14Z)-eicosatetraenedioate . Also catalyzes the reduction of benzoquinones . . |
Accessions | ENST00000504894.1 H0Y9N0 D6RIB1 ENST00000512499.5 ENST00000265512.12 [P08319-1] ENST00000505590.5 [P08319-2] D6R9K8 ENST00000506705.5 D6RF43 ENST00000504125.1 ENST00000509471.5 ENST00000508393.5 [P08319-2] P08319 |