Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 23% ± 5% | |
B cell | 3 studies | 19% ± 2% | |
endothelial cell | 3 studies | 20% ± 3% | |
microglial cell | 3 studies | 21% ± 2% | |
glutamatergic neuron | 3 studies | 30% ± 10% | |
macrophage | 3 studies | 21% ± 3% | |
astrocyte | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2159.04 | 258 / 258 | 100% | 6.04 | 230 / 230 |
esophagus | 100% | 1050.02 | 1445 / 1445 | 100% | 5.07 | 183 / 183 |
intestine | 100% | 1529.71 | 966 / 966 | 100% | 7.88 | 527 / 527 |
pancreas | 100% | 860.23 | 328 / 328 | 100% | 6.01 | 178 / 178 |
prostate | 100% | 1383.71 | 245 / 245 | 100% | 6.00 | 502 / 502 |
stomach | 100% | 1124.89 | 359 / 359 | 100% | 7.07 | 286 / 286 |
thymus | 100% | 1390.82 | 653 / 653 | 100% | 9.03 | 604 / 605 |
uterus | 100% | 1304.74 | 170 / 170 | 100% | 5.92 | 457 / 459 |
brain | 100% | 856.78 | 2630 / 2642 | 100% | 5.50 | 705 / 705 |
ovary | 100% | 1231.96 | 180 / 180 | 100% | 4.09 | 428 / 430 |
lung | 100% | 1040.78 | 578 / 578 | 99% | 5.15 | 1149 / 1155 |
skin | 100% | 1211.63 | 1808 / 1809 | 99% | 6.07 | 469 / 472 |
kidney | 100% | 1275.13 | 89 / 89 | 99% | 5.37 | 894 / 901 |
bladder | 100% | 1341.67 | 21 / 21 | 99% | 6.32 | 500 / 504 |
breast | 100% | 1215.29 | 459 / 459 | 99% | 4.76 | 1108 / 1118 |
liver | 100% | 1166.26 | 226 / 226 | 98% | 4.24 | 397 / 406 |
adipose | 100% | 1058.45 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 7.06 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.38 | 29 / 29 |
spleen | 100% | 1766.94 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.18 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.69 | 1 / 1 |
blood vessel | 100% | 921.08 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 825.46 | 799 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1186.46 | 921 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 682.58 | 849 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006633 | Biological process | fatty acid biosynthetic process |
GO_0090410 | Biological process | malonate catabolic process |
GO_0006631 | Biological process | fatty acid metabolic process |
GO_0035338 | Biological process | long-chain fatty-acyl-CoA biosynthetic process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005739 | Cellular component | mitochondrion |
GO_0016878 | Molecular function | acid-thiol ligase activity |
GO_0090409 | Molecular function | malonyl-CoA synthetase activity |
GO_0005515 | Molecular function | protein binding |
GO_0031957 | Molecular function | very long-chain fatty acid-CoA ligase activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | ACSF3 |
Protein name | ACSF3 protein Malonate--CoA ligase ACSF3, mitochondrial (EC 6.2.1.76) (Acyl-CoA synthetase family member 3) Acyl-CoA synthetase family member 3 |
Synonyms | PSEC0197 |
Description | FUNCTION: Catalyzes the initial reaction in intramitochondrial fatty acid synthesis, by activating malonate and methylmalonate, but not acetate, into their respective CoA thioester . May have some preference toward very-long-chain substrates . . |
Accessions | ENST00000649953.1 ENST00000540697.5 F5H5A1 ENST00000538340.5 ENST00000541755.2 H0YGJ0 ENST00000535176.1 ENST00000537895.5 ENST00000406948.7 Q4G176 A0A3B3ISK9 H3BTS0 F5H2G6 H0YGC7 ENST00000614302.5 ENST00000378345.8 ENST00000542688.5 ENST00000537290.5 Q6P2C7 F5H3B2 F5GX20 F5H362 ENST00000543676.1 ENST00000317447.9 F5H755 ENST00000544543.5 H0YH37 |