ABTB2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	11 studies	30% ± 10%	Explore
oligodendrocyte precursor cell	9 studies	27% ± 9%	Explore
astrocyte	6 studies	25% ± 8%	Explore
cardiac muscle cell	4 studies	23% ± 2%	Explore
fibroblast	4 studies	29% ± 6%	Explore
neuron	3 studies	24% ± 10%	Explore
hepatocyte	3 studies	51% ± 18%	Explore
Mueller cell	3 studies	19% ± 2%	Explore
glutamatergic neuron	3 studies	22% ± 7%	Explore
GABAergic neuron	3 studies	25% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	24% ± 8%	Explore
kidney	3 studies	25% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	837.59	962 / 966	96%	12.30	507 / 527
brain	99%	1043.34	2622 / 2642	96%	14.51	676 / 705
skin	97%	1233.16	1760 / 1809	97%	29.47	458 / 472
liver	100%	1424.51	226 / 226	93%	11.58	378 / 406
esophagus	94%	817.44	1354 / 1445	96%	20.36	175 / 183
kidney	100%	2020.54	89 / 89	88%	14.41	796 / 901
prostate	100%	1288.24	244 / 245	89%	8.55	445 / 502
lung	98%	699.58	569 / 578	88%	9.97	1013 / 1155
thymus	95%	537.12	622 / 653	90%	17.46	543 / 605
uterus	100%	1526.08	170 / 170	81%	8.70	373 / 459
bladder	100%	849.10	21 / 21	79%	8.09	396 / 504
stomach	74%	489.16	264 / 359	98%	14.53	279 / 286
pancreas	77%	284.42	254 / 328	91%	15.04	162 / 178
ovary	92%	591.31	165 / 180	75%	7.54	322 / 430
breast	92%	505.87	420 / 459	71%	7.85	789 / 1118
adrenal gland	100%	2638.54	258 / 258	59%	8.91	135 / 230
muscle	100%	1839.60	803 / 803	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	4.51	1 / 1
blood vessel	100%	1321.89	1332 / 1335	0%	0	0 / 0
heart	98%	1849.03	847 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	93%	14.75	74 / 80
adipose	92%	511.06	1106 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	79%	13.81	23 / 29
tonsil	0%	0	0 / 0	64%	6.39	29 / 45
spleen	51%	170.95	123 / 241	0%	0	0 / 0
peripheral blood	32%	285.25	301 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0