I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 6 studies | 26% ± 6% | |
| epithelial cell | 3 studies | 18% ± 2% | |
| GABAergic neuron | 3 studies | 26% ± 3% | |
| glutamatergic neuron | 3 studies | 38% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| ciliated cell | 6 studies | 26% ± 6% | |
| epithelial cell | 3 studies | 18% ± 2% | |
| GABAergic neuron | 3 studies | 26% ± 3% | |
| glutamatergic neuron | 3 studies | 38% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1067.75 | 1445 / 1445 | 100% | 31.94 | 183 / 183 |
| ovary | 100% | 855.82 | 180 / 180 | 100% | 29.16 | 430 / 430 |
| stomach | 100% | 886.43 | 359 / 359 | 100% | 28.88 | 286 / 286 |
| brain | 100% | 1069.27 | 2641 / 2642 | 100% | 30.66 | 705 / 705 |
| thymus | 100% | 1709.61 | 653 / 653 | 100% | 31.16 | 604 / 605 |
| intestine | 100% | 989.74 | 966 / 966 | 100% | 30.18 | 526 / 527 |
| lung | 100% | 925.79 | 576 / 578 | 100% | 29.00 | 1155 / 1155 |
| bladder | 100% | 968.81 | 21 / 21 | 100% | 25.43 | 502 / 504 |
| prostate | 100% | 1086.76 | 245 / 245 | 100% | 23.71 | 500 / 502 |
| breast | 100% | 1035.06 | 459 / 459 | 100% | 32.78 | 1113 / 1118 |
| pancreas | 100% | 708.60 | 328 / 328 | 99% | 18.88 | 177 / 178 |
| uterus | 100% | 1028.86 | 170 / 170 | 99% | 30.06 | 456 / 459 |
| adrenal gland | 100% | 939.79 | 258 / 258 | 98% | 17.22 | 226 / 230 |
| kidney | 100% | 1015.96 | 89 / 89 | 98% | 18.42 | 885 / 901 |
| skin | 100% | 1332.00 | 1809 / 1809 | 95% | 17.31 | 448 / 472 |
| liver | 100% | 632.00 | 226 / 226 | 92% | 12.29 | 374 / 406 |
| adipose | 100% | 947.32 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 13.41 | 29 / 29 |
| spleen | 100% | 674.30 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 30.31 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 11.25 | 1 / 1 |
| blood vessel | 100% | 757.99 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 656.31 | 800 / 803 | 0% | 0 | 0 / 0 |
| heart | 97% | 622.55 | 835 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 88% | 12.13 | 70 / 80 |
| peripheral blood | 83% | 482.33 | 771 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0051489 | Biological process | regulation of filopodium assembly |
| GO_0030833 | Biological process | regulation of actin filament polymerization |
| GO_0048813 | Biological process | dendrite morphogenesis |
| GO_0016607 | Cellular component | nuclear speck |
| GO_0032433 | Cellular component | filopodium tip |
| GO_0030027 | Cellular component | lamellipodium |
| GO_0030425 | Cellular component | dendrite |
| GO_0030426 | Cellular component | growth cone |
| GO_0005634 | Cellular component | nucleus |
| GO_0003785 | Molecular function | actin monomer binding |
| GO_0051015 | Molecular function | actin filament binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | ABITRAM |
| Protein name | Protein Abitram (Actin-binding transcription modulator) (Protein Simiate) Protein Simiate Actin binding transcription modulator |
| Synonyms | C9orf6 FAM206A |
| Description | FUNCTION: Actin-binding protein that regulates actin polymerization, filopodia dynamics and increases the branching of proximal dendrites of developing neurons. . |
| Accessions | X6REY2 ENST00000322940.11 ENST00000445175.1 X6R8U7 Q9NX38 ENST00000374624.7 |
