Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| ciliated cell | 14 studies | 47% ± 18% | |
| respiratory goblet cell | 6 studies | 37% ± 12% | |
| basal cell | 4 studies | 29% ± 10% | |
| deuterosomal cell | 4 studies | 39% ± 16% | |
| epithelial cell | 3 studies | 36% ± 13% | |
| secretory cell | 3 studies | 41% ± 12% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 3 studies | 28% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| lung | 83% | 585.78 | 482 / 578 | 57% | 6.10 | 661 / 1155 |
| thymus | 99% | 1270.74 | 647 / 653 | 35% | 1.28 | 213 / 605 |
| esophagus | 37% | 206.83 | 536 / 1445 | 65% | 8.14 | 119 / 183 |
| tonsil | 0% | 0 | 0 / 0 | 84% | 14.47 | 38 / 45 |
| peripheral blood | 60% | 645.33 | 562 / 929 | 0% | 0 | 0 / 0 |
| spleen | 59% | 233.89 | 143 / 241 | 0% | 0 | 0 / 0 |
| skin | 45% | 80.06 | 818 / 1809 | 14% | 0.41 | 66 / 472 |
| bladder | 33% | 42.62 | 7 / 21 | 19% | 1.04 | 94 / 504 |
| liver | 46% | 62.10 | 105 / 226 | 1% | 0.05 | 4 / 406 |
| uterus | 6% | 19.15 | 10 / 170 | 37% | 2.85 | 172 / 459 |
| kidney | 28% | 95.98 | 25 / 89 | 9% | 0.29 | 85 / 901 |
| pancreas | 20% | 20.44 | 64 / 328 | 14% | 0.27 | 25 / 178 |
| intestine | 15% | 16.11 | 149 / 966 | 12% | 0.23 | 61 / 527 |
| breast | 14% | 16.26 | 64 / 459 | 7% | 0.46 | 77 / 1118 |
| brain | 8% | 9.90 | 206 / 2642 | 8% | 0.25 | 59 / 705 |
| ovary | 1% | 0.69 | 2 / 180 | 15% | 0.27 | 63 / 430 |
| stomach | 1% | 2.18 | 3 / 359 | 12% | 0.25 | 33 / 286 |
| adipose | 4% | 3.91 | 51 / 1204 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 0.26 | 1 / 258 | 3% | 0.06 | 8 / 230 |
| prostate | 3% | 2.06 | 7 / 245 | 0% | 0.01 | 2 / 502 |
| heart | 2% | 1.68 | 14 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
| muscle | 1% | 3.43 | 10 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 0% | 0.48 | 5 / 1335 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_1900244 | Biological process | positive regulation of synaptic vesicle endocytosis |
| GO_0035627 | Biological process | ceramide transport |
| GO_0055085 | Biological process | transmembrane transport |
| GO_0006869 | Biological process | lipid transport |
| GO_0032376 | Biological process | positive regulation of cholesterol transport |
| GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
| GO_0030667 | Cellular component | secretory granule membrane |
| GO_0035577 | Cellular component | azurophil granule membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0097708 | Cellular component | intracellular vesicle |
| GO_0005319 | Molecular function | lipid transporter activity |
| GO_0042626 | Molecular function | ATPase-coupled transmembrane transporter activity |
| GO_0140359 | Molecular function | ABC-type transporter activity |
| GO_0016887 | Molecular function | ATP hydrolysis activity |
| GO_0005524 | Molecular function | ATP binding |
| Gene name | ABCA13 |
| Protein name | Alternative protein ABCA13 ATP binding cassette subfamily A member 13 ATP-binding cassette sub-family A member 13 (EC 7.6.2.-) |
| Synonyms | |
| Description | FUNCTION: May mediate the cholesterol and gangliosides transport from the plasma membrane to intracellular vesicles in an ATP hydrolysis dependent manner, thus playing a role in their internalization by endocytic retrograde transport and may also participate in the endocytosis of synaptic vesicle in cortical neurons. . |
| Accessions | F5H7B7 ENST00000417403.5 [Q86UQ4-2] H7C0U5 A0A0A0MT16 H0Y4D2 ENST00000544596.5 ENST00000453246.5 ENST00000411975.5 ENST00000435451.1 L8E9N5 H7BZI9 ENST00000435803.6 Q86UQ4 |
