Studies | OmnibusX

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cell type (236)

condition (31)

development stage (6)

technology (12)

tissue (35)

epithelial cell

B cell

CD16-negative, CD56-bright natural killer cell, human

CD16-positive, CD56-dim natural killer cell, human

CD4-positive helper T cell

CD4-positive, alpha-beta T cell

CD4-positive, alpha-beta cytotoxic T cell

CD4-positive, alpha-beta memory T cell

CD8-positive, alpha-beta T cell

CD8-positive, alpha-beta memory T cell

GABAergic amacrine cell

GABAergic interneuron

GABAergic neuron

H1 horizontal cell

H2 horizontal cell

Hofbauer cell

IgA plasma cell

IgG plasma cell

IgM plasma cell

Kupffer cell

Langerhans cell

M cell of gut

Merkel cell

Mueller cell

OFF-bipolar cell

ON-bipolar cell

Purkinje cell

Schwann cell

T cell

T follicular helper cell

T-helper 1 cell

T-helper 17 cell

T-helper 2 cell

abnormal cell

acinar cell

adipocyte

adventitial cell

airway submucosal gland

alveolar macrophage

amacrine cell

astrocyte

basal cell

basophil

brush cell

capillary endothelial cell

cardiac muscle cell

central memory CD4-positive, alpha-beta T cell

central memory CD8-positive, alpha-beta T cell

chandelier cell

cholangiocyte

chondrocyte

ciliated cell

classical monocyte

club cell

colon epithelial cell

common lymphoid progenitor

common myeloid progenitor

cone retinal bipolar cell

connective tissue cell

conventional dendritic cell

cortical interneuron

dendritic cell

deuterosomal cell

differentiation-committed oligodendrocyte precursor

dopaminergic neuron

double negative thymocyte

double-positive, alpha-beta thymocyte

duct epithelial cell

early lymphoid progenitor

effector CD4-positive, alpha-beta T cell

effector CD8-positive, alpha-beta T cell

effector memory CD4-positive, alpha-beta T cell

effector memory CD4-positive, alpha-beta T cell, terminally differentiated

effector memory CD8-positive, alpha-beta T cell

effector memory CD8-positive, alpha-beta T cell, terminally differentiated

endocardial cell

endocrine cell

endothelial cell

endothelial cell of artery

endothelial cell of lymphatic vessel

endothelial cell of sinusoid

endothelial cell of vascular tree

endothelial stalk cell

enteric neuron

enterochromaffin-like cell

enterocyte

enteroendocrine cell

eosinophil

ependymal cell

epithelial cell of proximal tubule

epithelial cell of thymus

erythroblast

erythrocyte

erythroid lineage cell

exhausted T cell

extravillous trophoblast

fibroblast

follicular B cell

follicular dendritic cell

foveolar cell of stomach

gamma-delta T cell

germinal center B cell

glandular epithelial cell

glial cell

glomerular endothelial cell

glutamatergic neuron

glycinergic amacrine cell

goblet cell

granule cell

granulocyte

granulocyte monocyte progenitor cell

granulosa cell

group 2 innate lymphoid cell

group 3 innate lymphoid cell

hematopoietic precursor cell

hematopoietic stem cell

hepatic stellate cell

hepatocyte

hillock cell

immature B cell

inflammatory macrophage

inhibitory interneuron

innate lymphoid cell

intermediate monocyte

interneuron

interstitial cell of Cajal

intestinal crypt stem cell

intraepithelial lymphocyte

ionocyte

keratinocyte

kidney connecting tubule epithelial cell

kidney distal convoluted tubule epithelial cell

kidney failure

kidney loop of Henle epithelial cell

leukocyte

luminal adaptive secretory precursor cell of mammary gland

luminal cell of prostate epithelium

luminal hormone-sensing cell of mammary gland

lymphangioblast

lymphocyte

macroglial cell

macrophage

mast cell

mature NK T cell

medium spiny neuron

megakaryocyte

megakaryocyte-erythroid progenitor cell

melanocyte

memory B cell

mesangial cell

mesothelial cell

microglial cell

monocyte

monocyte-derived dendritic cell

mononuclear phagocyte

motor neuron

mucosal invariant T cell

mucus secreting cell

mural cell

muscle cell

myeloid cell

myoepithelial cell

myofibroblast cell

naive B cell

naive thymus-derived CD4-positive, alpha-beta T cell

naive thymus-derived CD8-positive, alpha-beta T cell

natural killer cell

neural crest cell

neural progenitor cell

neuroblast (sensu Vertebrata)

neuroendocrine cell

neuron

neutrophil

non-classical monocyte

oligodendrocyte

oligodendrocyte precursor cell

osteoclast

pancreatic A cell

pancreatic D cell

pancreatic PP cell

pancreatic ductal cell

pancreatic epsilon cell

pancreatic stellate cell

paneth cell

papillary tips cell

parietal epithelial cell

peptic cell

pericyte

placental villous trophoblast

plasma cell

plasmablast

plasmacytoid dendritic cell

platelet

pneumocyte

podocyte

pre-conventional dendritic cell

preadipocyte

precursor B cell

precursor cell

pro-B cell

pro-T cell

progenitor cell

progenitor cell of mammary luminal epithelium

pyramidal neuron

radial glial cell

regulatory T cell

renal alpha-intercalated cell

renal beta-intercalated cell

renal intercalated cell

renal principal cell

respiratory goblet cell

respiratory suprabasal cell

retina horizontal cell

retinal bipolar neuron

retinal cone cell

retinal ganglion cell

retinal pigment epithelial cell

retinal rod cell

rod bipolar cell

secretory cell

serous secreting cell

smooth muscle cell

squamous epithelial cell

stratified epithelial cell

syncytiotrophoblast

syncytiotrophoblast cell

thymocyte

tip cell

tissue-resident macrophage

transit amplifying cell

type B pancreatic cell

type I pneumocyte

type II pneumocyte

unipolar brush cell

urothelial cell

vein endothelial cell

17 studies

51 datasets

4,099,194 cells

	Title	Total cells
1	A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra https://doi.org/10.1016/j.celrep.2018.11.086Deposited data# 28,702 cells Dataset 1: A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra - All Human Cells cell type: epithelial cell of urethra expressed genes: CXCL1		Explore
2	A molecular single-cell lung atlas of lethal COVID-19 https://doi.org/10.1038/s41586-021-03569-1Deposited data# 116,313 cells Dataset 1: A molecular single-cell lung atlas of lethal COVID-19 cell type: Cycling epithelial ECM-high epithelial expressed genes: CXCL1		Explore
3	An integrated cell atlas of the lung in health and disease https://doi.org/10.1038/s41591-023-02327-2Deposited data# 584,944 cells Dataset 1: An integrated cell atlas of the human lung in health and disease (core) cell type: AT0 expressed genes: CXCL1		Explore
4	Cells of the human intestinal tract mapped across space and time https://doi.org/10.1038/s41586-021-03852-1Deposited data# 428,469 cells Dataset 1: Total - Cells of the human intestinal tract mapped across space and time cell type: epithelial cell expressed genes: CXCL1		Explore
5	Charting human development using a multi-endodermal organ atlas and organoid models https://doi.org/10.1016/j.cell.2021.04.028Deposited data# 155,232 cells Dataset 1: Developing Human Atlas cell type: Distal lung epithelium Gastrointestinal epithelium Intestinal epithelium expressed genes: CXCL1		Explore
6	Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade https://doi.org/10.1101/2021.09.17.21263540Deposited data# 89,849 cells Dataset 1: 3-prime FGID data cell type: epithelial cell expressed genes: CXCL1		Explore
7	Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs new combination cancer therapy strategies https://doi.org/10.1038/s41590-023-01504-2Deposited data# 82,991 cells Dataset 1: Transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies cell type: Epithelial expressed genes: CXCL1		Explore
8	Construction of a human cell landscape at single-cell level https://doi.org/10.1038/s41586-020-2157-4Deposited data# 599,926 cells Dataset 1: Construction of a human cell landscape at single-cell level cell type: Epithelial cell Epithelial cell (intermediated) Stratified epithelial cell expressed genes: CXCL1		Explore
9	Generation of complex human induced pluripotent stem cell-derived bone marrow organoids https://doi.org/10.1038/s41592-024-02172-2Deposited data# 31,040 cells Dataset 1: Bone marrow organoids (BMO) cell type: epithelial expressed genes: CXCL1		Explore
10	Local and systemic responses to SARS-CoV-2 infection in children and adults https://doi.org/10.1038/s41586-021-04345-xDeposited data# 659,197 cells Dataset 2: Airway cell type: Transit epi 1 Transit epi 2 expressed genes: CXCL1		Explore
11	Longitudinal profiling of respiratory and systemic immune responses reveals myeloid cell-driven lung inflammation in severe COVID-19 https://doi.org/10.1016/j.immuni.2021.03.005Deposited data# 126,564 cells Dataset 2: 49 years old male - Airway Wash (2 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 5: 66 years old female - Airway Wash (2 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 6: 74 years old female - Airway Wash (3 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 13: 74 years old female - Airway Wash (1 day post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 15: 66 years old female - Airway Wash (7 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 17: 74 years old female - Airway Wash (4 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 19: 66 years old female - Airway Wash (3 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 20: 74 years old female - Airway Wash (6 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 21: 66 years old female - Airway Wash (4 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 22: 49 years old male - Airway Wash (1 day post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 23: 49 years old male - Airway Wash (3 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 24: 74 years old female - Airway Wash (8 days post-intubation) cell type: epithelial expressed genes: CXCL1 Dataset 26: 82 years old female - Airway Wash (1 day post-intubation) cell type: epithelial expressed genes: CXCL1		Explore
12	Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro https://doi.org/10.1038/s41588-021-00972-2Deposited data# 218,979 cells Dataset 1: Non-pregnant Uterus (Endometrium - All) cell type: SOX9 expressed genes: CXCL1		Explore
13	Single cell analysis of mouse and human prostate reveals novel fibroblasts with specialized distribution and microenvironment interactions https://doi.org/10.1002/path.5751Deposited data# 83,451 cells Dataset 1: All Human Cells cell type: epithelial cell of urethra expressed genes: CXCL1		Explore
14	Spatiotemporal analysis of human intestinal development at single-cell resolution https://doi.org/10.1016/j.cell.2020.12.016Deposited data# 76,592 cells Dataset 1: Spatiotemporal analysis of human intestinal development at single-cell resolution: All cells cell type: Epithelium expressed genes: CXCL1		Explore
15	Spatiotemporal immune zonation of the human kidney https://doi.org/10.1126/science.aat5031Deposited data# 67,465 cells Dataset 2: Fetal kidney dataset: full cell type: Pelvic epithelium - distal UB expressed genes: CXCL1		Explore
16	The landscape of immune dysregulation in Crohn’s disease revealed through single-cell transcriptomic profiling in the ileum and colon https://doi.org/10.1016/j.immuni.2023.01.002Deposited data# 720,633 cells Dataset 4: colon epithelial cell type: Epithelial Cycling cells expressed genes: CXCL1		Explore
17	Urethral luminal epithelia are castration-insensitive cells of the proximal prostate https://doi.org/10.1002/pros.24020Deposited data# 28,847 cells Dataset 1: Urethral luminal epithelia are castration-insensitive cells of the proximal prostate - All Human Cells cell type: epithelial cell of urethra expressed genes: CXCL1		Explore

Published data collections