Published data collections

A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing

https://doi.org/10.1016/j.celrep.2022.111838Deposited data# 86,708 cells

A molecular single-cell lung atlas of lethal COVID-19

https://doi.org/10.1038/s41586-021-03569-1Deposited data# 116,313 cells

Altered human oligodendrocyte heterogeneity in multiple sclerosis

https://doi.org/10.1038/s41586-019-0903-2Deposited data# 17,799 cells

An atlas of healthy and injured cell states and niches in the human kidney

https://doi.org/10.1038/s41586-023-05769-3Deposited data# 304,652 cells

Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution

https://doi.org/10.1016/j.cell.2020.08.013Deposited data# 98,348 cells

Cell atlas of the human ocular anterior segment: Tissue-specific and shared cell types

https://doi.org/10.1073/pnas.2200914119Deposited data# 195,248 cells

Charting human development using a multi-endodermal organ atlas and organoid models

https://doi.org/10.1016/j.cell.2021.04.028Deposited data# 155,232 cells

Comparative transcriptomics reveals human-specific cortical features

https://doi.org/10.1126/science.ade9516Deposited data# 156,285 cells

Cryptic exon detection and transcriptomic changes revealed in single-nuclei RNA sequencing of C9ORF72 patients spanning the ALS-FTD spectrum

https://doi.org/10.1007/s00401-023-02599-5Deposited data# 461,290 cells

Dysregulated lung stroma drives emphysema exacerbation by potentiating resident lymphocytes to suppress an epithelial stem cell reservoir

https://doi.org/10.1016/j.immuni.2023.01.032Deposited data# 57,747 cells

Dysregulation of brain and choroid plexus cell types in severe COVID-19

https://doi.org/10.1038/s41586-021-03710-0Deposited data# 65,309 cells

Human photoreceptor cells from different macular subregions have distinct transcriptional profiles

https://doi.org/10.1093/hmg/ddab140Deposited data# 34,323 cells

Identification of distinct tumor cell populations and key genetic mechanisms through single cell sequencing in hepatoblastoma

https://doi.org/10.1038/s42003-021-02562-8Deposited data# 67,110 cells

Intratumoral heterogeneity in recurrent pediatric pilocytic astrocytomas

https://explore.data.humancellatlas.org/projects/575c0ad9-c78e-469b-9fdf-9a68dd881137Deposited data# 35,637 cells

Molecular characterization of selectively vulnerable neurons in Alzheimer's Disease

https://doi.org/10.1038/s41593-020-00764-7Deposited data# 106,136 cells

Multi-omic profiling of the developing human cerebral cortex at the single cell level

https://doi.org/10.1126/sciadv.adg3754Deposited data# 45,549 cells

Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression

https://doi.org/10.1038/s41467-022-32972-zDeposited data# 39,176 cells

Resolving cellular and molecular diversity along the hippocampal anterior-to-posterior axis in humans

https://doi.org/10.1016/j.neuron.2021.05.003Deposited data# 129,905 cells

SARS‐CoV‐2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells

https://doi.org/10.15252/embj.20105114Deposited data# 57,229 cells

Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

https://doi.org/10.1038/s41467-021-22368-wDeposited data# 19,985 cells

Single cell transcriptomic profiling identifies molecular phenotypes of newborn human lung cells

https://doi.org/10.3390/genes15030298Deposited data# 5,499 cells

Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder

https://doi.org/10.1038/s41467-024-45165-7Deposited data# 98,848 cells

Single-Cell, Single-Nucleus, and Spatial RNA Sequencing of the Human Liver Identifies Cholangiocyte and Mesenchymal Heterogeneity

https://doi.org/10.1002/hep4.1854Deposited data# 73,295 cells

Single-cell genomic profiling of human dopamine neurons identifies a population that selectively degenerates in Parkinson’s disease

https://doi.org/10.1038/s41593-022-01061-1Deposited data# 572,156 cells

Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration

https://doi.org/10.1038/s41467-019-12780-8Deposited data# 20,091 cells

Spatial and cell type transcriptional landscape of human cerebellar development

https://doi.org/10.1038/s41593-021-00872-yDeposited data# 69,174 cells

Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches

https://doi.org/10.1016/j.cell.2021.12.018Deposited data# 167,598 cells