Published data collections

A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics

https://doi.org/10.1016/j.jcmgh.2022.02.007Deposited data# 12,590 cells

An integrated cell atlas of the lung in health and disease

https://doi.org/10.1038/s41591-023-02327-2Deposited data# 584,944 cells

Cells of the human intestinal tract mapped across space and time

https://doi.org/10.1038/s41586-021-03852-1Deposited data# 428,469 cells

Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade

https://doi.org/10.1101/2021.09.17.21263540Deposited data# 89,849 cells

Differential pre-malignant programs and microenvironment chart distinct paths to malignancy in human colorectal polyps

https://doi.org/10.1016/j.cell.2021.11.031Deposited data# 133,507 cells

Integrated analysis of multimodal single-cell data (version 2)

https://doi.org/10.1016/j.cell.2021.04.048Deposited data# 584,884 cells

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

https://doi.org/10.1016/j.cell.2019.06.029Deposited data# 34,772 cells

Local and systemic responses to SARS-CoV-2 infection in children and adults

https://doi.org/10.1038/s41586-021-04345-xDeposited data# 659,197 cells

Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer

https://doi.org/10.1016/j.ccell.2021.09.008Deposited data# 147,137 cells

Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn’s Disease

https://doi.org/10.1016/j.devcel.2020.11.010Deposited data# 85,351 cells

Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells

https://doi.org/10.1371/journal.pbio.3001143Deposited data# 77,650 cells

The landscape of immune dysregulation in Crohn’s disease revealed through single-cell transcriptomic profiling in the ileum and colon

https://doi.org/10.1016/j.immuni.2023.01.002Deposited data# 720,633 cells