Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 11 studies | 41% ± 21% | |
glutamatergic neuron | 11 studies | 48% ± 21% | |
oligodendrocyte precursor cell | 11 studies | 39% ± 8% | |
neuron | 6 studies | 40% ± 20% | |
interneuron | 6 studies | 52% ± 12% | |
granule cell | 4 studies | 56% ± 7% | |
amacrine cell | 4 studies | 70% ± 26% | |
monocyte | 4 studies | 24% ± 4% | |
endothelial cell | 3 studies | 42% ± 22% | |
GABAergic interneuron | 3 studies | 47% ± 9% | |
macrophage | 3 studies | 34% ± 6% | |
microglial cell | 3 studies | 35% ± 14% | |
retinal bipolar neuron | 3 studies | 45% ± 32% | |
GABAergic amacrine cell | 3 studies | 48% ± 10% | |
OFF-bipolar cell | 3 studies | 42% ± 17% | |
glycinergic amacrine cell | 3 studies | 94% ± 5% | |
alveolar macrophage | 3 studies | 27% ± 6% | |
astrocyte | 3 studies | 39% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 37% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 91% | 460.36 | 2415 / 2642 | 86% | 7.07 | 607 / 705 |
prostate | 80% | 120.20 | 196 / 245 | 27% | 0.46 | 138 / 502 |
bladder | 57% | 47.10 | 12 / 21 | 7% | 0.17 | 34 / 504 |
kidney | 57% | 59.75 | 51 / 89 | 5% | 0.12 | 49 / 901 |
lymph node | 0% | 0 | 0 / 0 | 55% | 4.77 | 16 / 29 |
lung | 46% | 34.01 | 267 / 578 | 8% | 0.36 | 95 / 1155 |
intestine | 45% | 49.99 | 439 / 966 | 3% | 0.09 | 15 / 527 |
spleen | 47% | 35.10 | 113 / 241 | 0% | 0 | 0 / 0 |
skin | 28% | 121.35 | 504 / 1809 | 16% | 0.64 | 75 / 472 |
adrenal gland | 4% | 3.31 | 10 / 258 | 27% | 2.01 | 63 / 230 |
peripheral blood | 25% | 43.90 | 234 / 929 | 0% | 0 | 0 / 0 |
stomach | 12% | 6.81 | 42 / 359 | 8% | 0.39 | 23 / 286 |
thymus | 8% | 6.96 | 53 / 653 | 4% | 0.13 | 24 / 605 |
uterus | 5% | 7.04 | 8 / 170 | 7% | 0.30 | 33 / 459 |
breast | 5% | 3.31 | 23 / 459 | 6% | 0.22 | 66 / 1118 |
ovary | 8% | 5.22 | 14 / 180 | 3% | 0.05 | 13 / 430 |
adipose | 10% | 6.81 | 119 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 3% | 1.68 | 41 / 1445 | 3% | 0.12 | 6 / 183 |
liver | 1% | 0.99 | 3 / 226 | 5% | 0.17 | 19 / 406 |
pancreas | 0% | 0.20 | 1 / 328 | 3% | 0.11 | 5 / 178 |
eye | 0% | 0 | 0 / 0 | 3% | 0.05 | 2 / 80 |
blood vessel | 2% | 1.69 | 30 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
muscle | 0% | 0.05 | 1 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 0.13 | 1 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010975 | Biological process | regulation of neuron projection development |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_1902952 | Biological process | positive regulation of dendritic spine maintenance |
GO_0010976 | Biological process | positive regulation of neuron projection development |
GO_0098793 | Cellular component | presynapse |
GO_0098794 | Cellular component | postsynapse |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0030426 | Cellular component | growth cone |
GO_1901588 | Cellular component | dendritic microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0043198 | Cellular component | dendritic shaft |
GO_0005634 | Cellular component | nucleus |
GO_0003674 | Molecular function | molecular_function |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF804A |
Protein name | Zinc finger protein 804A ZNF804A protein Alternative protein ZNF804A |
Synonyms | C2orf10 |
Description | |
Accessions | Q7Z570 A5PKU0 ENST00000302277.7 L8E9U1 B9EGN2 |