Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 11 studies | 29% ± 11% | |
endothelial cell | 10 studies | 24% ± 6% | |
microglial cell | 6 studies | 23% ± 7% | |
myeloid cell | 6 studies | 24% ± 6% | |
oligodendrocyte | 6 studies | 25% ± 7% | |
astrocyte | 5 studies | 27% ± 8% | |
glutamatergic neuron | 4 studies | 54% ± 22% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
alveolar macrophage | 4 studies | 34% ± 13% | |
monocyte | 4 studies | 20% ± 4% | |
epithelial cell | 3 studies | 32% ± 5% | |
lymphocyte | 3 studies | 21% ± 5% | |
hepatocyte | 3 studies | 44% ± 22% | |
GABAergic neuron | 3 studies | 48% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 41% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1801.43 | 1445 / 1445 | 100% | 9.50 | 183 / 183 |
prostate | 100% | 2048.70 | 245 / 245 | 100% | 11.42 | 500 / 502 |
breast | 100% | 2575.34 | 459 / 459 | 99% | 11.97 | 1111 / 1118 |
thymus | 100% | 2169.63 | 653 / 653 | 99% | 7.05 | 596 / 605 |
lung | 100% | 2856.94 | 578 / 578 | 98% | 7.80 | 1133 / 1155 |
stomach | 100% | 1332.41 | 358 / 359 | 98% | 6.78 | 281 / 286 |
liver | 100% | 2595.53 | 226 / 226 | 97% | 7.58 | 394 / 406 |
uterus | 100% | 2120.46 | 170 / 170 | 97% | 7.09 | 444 / 459 |
pancreas | 98% | 886.06 | 322 / 328 | 98% | 6.20 | 175 / 178 |
intestine | 100% | 1984.74 | 966 / 966 | 96% | 5.85 | 507 / 527 |
skin | 100% | 2435.09 | 1807 / 1809 | 96% | 6.34 | 454 / 472 |
bladder | 100% | 2289.33 | 21 / 21 | 96% | 6.27 | 484 / 504 |
kidney | 100% | 1291.65 | 89 / 89 | 95% | 7.27 | 859 / 901 |
ovary | 100% | 2050.13 | 180 / 180 | 95% | 5.84 | 407 / 430 |
brain | 97% | 1233.71 | 2562 / 2642 | 97% | 5.92 | 686 / 705 |
adrenal gland | 100% | 1313.73 | 258 / 258 | 86% | 4.16 | 197 / 230 |
adipose | 100% | 2730.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3202.06 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3068.94 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2256.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.39 | 45 / 45 |
heart | 98% | 1398.02 | 848 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.94 | 28 / 29 |
peripheral blood | 95% | 1594.64 | 885 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 7.35 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
GO_0008270 | Molecular function | zinc ion binding |
GO_0035091 | Molecular function | phosphatidylinositol binding |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | ZCCHC2 |
Protein name | Zinc finger CCHC-type containing 2 ZCCHC2 protein (Zinc finger, CCHC domain containing 2, isoform CRA_c) Zinc finger CCHC domain-containing protein 2 |
Synonyms | KIAA1744 hCG_1978811 C18orf49 |
Description | |
Accessions | K7ESN2 ENST00000586834.1 [Q9C0B9-2] K7EKB8 ENST00000588676.1 ENST00000585873.5 ENST00000621048.4 ENST00000591145.1 A0A087WXC7 Q9C0B9 K7ERQ9 Q9BRD4 ENST00000269499.10 [Q9C0B9-1] |