Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 43% ± 30% | |
astrocyte | 4 studies | 26% ± 10% | |
oligodendrocyte | 4 studies | 30% ± 11% | |
interneuron | 4 studies | 36% ± 18% | |
GABAergic neuron | 3 studies | 51% ± 29% | |
oligodendrocyte precursor cell | 3 studies | 36% ± 21% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 46% ± 28% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 729.49 | 2639 / 2642 | 78% | 4.16 | 552 / 705 |
stomach | 99% | 278.87 | 356 / 359 | 76% | 1.93 | 216 / 286 |
intestine | 100% | 442.22 | 966 / 966 | 72% | 1.58 | 378 / 527 |
adrenal gland | 95% | 159.39 | 244 / 258 | 68% | 1.86 | 157 / 230 |
prostate | 100% | 466.79 | 244 / 245 | 61% | 1.23 | 306 / 502 |
thymus | 100% | 432.31 | 650 / 653 | 59% | 1.17 | 359 / 605 |
kidney | 100% | 233.61 | 89 / 89 | 46% | 0.84 | 410 / 901 |
esophagus | 86% | 289.53 | 1245 / 1445 | 52% | 1.48 | 95 / 183 |
pancreas | 70% | 85.16 | 230 / 328 | 66% | 1.17 | 118 / 178 |
bladder | 100% | 416.10 | 21 / 21 | 33% | 0.73 | 165 / 504 |
ovary | 100% | 631.42 | 180 / 180 | 28% | 0.56 | 120 / 430 |
uterus | 100% | 656.65 | 170 / 170 | 19% | 0.44 | 88 / 459 |
lung | 98% | 219.16 | 568 / 578 | 21% | 0.44 | 239 / 1155 |
breast | 94% | 215.88 | 432 / 459 | 21% | 0.34 | 235 / 1118 |
blood vessel | 100% | 414.07 | 1334 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 191.70 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 94% | 199.56 | 1135 / 1204 | 0% | 0 | 0 / 0 |
liver | 74% | 97.13 | 167 / 226 | 19% | 0.35 | 77 / 406 |
skin | 82% | 113.48 | 1484 / 1809 | 7% | 0.14 | 32 / 472 |
heart | 61% | 101.20 | 526 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 22% | 30.94 | 206 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 21% | 0.32 | 6 / 29 |
muscle | 11% | 11.04 | 85 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 6% | 0.08 | 5 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0005634 | Cellular component | nucleus |
GO_0004521 | Molecular function | RNA endonuclease activity |
GO_0003729 | Molecular function | mRNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZC3H12B |
Protein name | Probable ribonuclease ZC3H12B (EC 3.1.-.-) (MCP-induced protein 2) (Zinc finger CCCH domain-containing protein 12B) Zinc finger CCCH-type containing 12B |
Synonyms | CXorf32 MCPIP2 |
Description | FUNCTION: May function as RNase and regulate the levels of target RNA species. . |
Accessions | A0A8Q3WM69 ENST00000338957.5 [Q5HYM0-1] ENST00000696368.1 A0A8Q3WL71 Q5HYM0 ENST00000696370.1 |