WSCD2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	4 studies	39% ± 11%	Explore
GABAergic neuron	4 studies	36% ± 9%	Explore
retinal bipolar neuron	3 studies	17% ± 1%	Explore
rod bipolar cell	3 studies	27% ± 3%	Explore
interneuron	3 studies	35% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	86%	5015.79	2264 / 2642	62%	4.71	434 / 705
thymus	100%	3765.63	650 / 653	44%	8.01	269 / 605
prostate	64%	711.07	156 / 245	73%	2.76	365 / 502
uterus	92%	1722.85	157 / 170	20%	2.03	94 / 459
esophagus	65%	2270.94	940 / 1445	26%	2.01	48 / 183
bladder	48%	461.86	10 / 21	38%	3.17	190 / 504
blood vessel	57%	539.68	755 / 1335	0%	0	0 / 0
intestine	42%	379.88	405 / 966	10%	0.37	54 / 527
stomach	27%	307.28	98 / 359	19%	1.04	53 / 286
pancreas	1%	2.86	2 / 328	44%	1.82	78 / 178
tonsil	0%	0	0 / 0	33%	2.42	15 / 45
adrenal gland	4%	34.50	11 / 258	25%	1.65	58 / 230
breast	17%	104.26	77 / 459	12%	0.54	134 / 1118
kidney	18%	85.55	16 / 89	9%	0.48	79 / 901
lung	2%	6.24	9 / 578	23%	1.33	262 / 1155
ovary	4%	20.37	8 / 180	19%	1.02	82 / 430
adipose	12%	89.30	147 / 1204	0%	0	0 / 0
skin	5%	24.94	94 / 1809	4%	0.16	20 / 472
eye	0%	0	0 / 0	9%	0.31	7 / 80
heart	2%	9.72	18 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	1%	0.03	3 / 406
muscle	0%	1.60	2 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1