Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 27% ± 8% | |
oligodendrocyte | 6 studies | 23% ± 6% | |
GABAergic neuron | 5 studies | 40% ± 20% | |
microglial cell | 4 studies | 21% ± 4% | |
epithelial cell | 4 studies | 25% ± 8% | |
astrocyte | 4 studies | 35% ± 5% | |
glutamatergic neuron | 4 studies | 50% ± 19% | |
oligodendrocyte precursor cell | 4 studies | 32% ± 8% | |
macrophage | 4 studies | 22% ± 4% | |
cardiac muscle cell | 3 studies | 17% ± 1% | |
retina horizontal cell | 3 studies | 21% ± 3% | |
interneuron | 3 studies | 45% ± 22% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 40% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 657.95 | 577 / 578 | 100% | 19.71 | 1155 / 1155 |
ovary | 100% | 851.45 | 180 / 180 | 100% | 20.35 | 429 / 430 |
prostate | 100% | 602.88 | 245 / 245 | 100% | 21.59 | 500 / 502 |
breast | 100% | 675.19 | 459 / 459 | 100% | 23.60 | 1113 / 1118 |
brain | 100% | 547.40 | 2636 / 2642 | 100% | 15.09 | 703 / 705 |
kidney | 100% | 922.17 | 89 / 89 | 99% | 22.66 | 896 / 901 |
thymus | 100% | 994.88 | 653 / 653 | 99% | 37.93 | 601 / 605 |
stomach | 100% | 481.19 | 359 / 359 | 99% | 15.86 | 284 / 286 |
intestine | 100% | 590.58 | 966 / 966 | 99% | 15.79 | 522 / 527 |
uterus | 100% | 642.69 | 170 / 170 | 99% | 15.89 | 454 / 459 |
esophagus | 100% | 528.33 | 1445 / 1445 | 99% | 14.29 | 181 / 183 |
pancreas | 99% | 372.85 | 326 / 328 | 99% | 14.18 | 177 / 178 |
bladder | 100% | 567.81 | 21 / 21 | 99% | 15.96 | 498 / 504 |
adrenal gland | 100% | 806.40 | 258 / 258 | 97% | 17.57 | 224 / 230 |
skin | 100% | 502.58 | 1807 / 1809 | 96% | 16.71 | 452 / 472 |
liver | 96% | 204.80 | 217 / 226 | 91% | 10.51 | 368 / 406 |
adipose | 100% | 585.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 628.00 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 676.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.18 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.90 | 1 / 1 |
muscle | 99% | 281.46 | 792 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 405.27 | 839 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 11.24 | 27 / 29 |
eye | 0% | 0 | 0 / 0 | 93% | 12.99 | 74 / 80 |
peripheral blood | 89% | 370.06 | 825 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
Gene name | WDSUB1 |
Protein name | WD repeat, SAM and U-box domain-containing protein 1 |
Synonyms | WDSAM1 |
Description | |
Accessions | B8ZZF2 ENST00000358147.8 [Q8N9V3-2] ENST00000392796.7 [Q8N9V3-1] ENST00000359774.9 [Q8N9V3-1] Q8N9V3 ENST00000409990.7 [Q8N9V3-1] ENST00000409124.1 |