VIT | OmnibusX

Name	Number of supported studies	Average coverage
fibroblast	6 studies	32% ± 11%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of VIT at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	97%	1917.74	446 / 459	62%	3.58	693 / 1118
esophagus	95%	1589.91	1377 / 1445	27%	2.99	49 / 183
skin	93%	1469.69	1678 / 1809	25%	7.58	117 / 472
prostate	60%	832.87	146 / 245	53%	1.53	268 / 502
ovary	98%	2254.94	177 / 180	13%	0.44	58 / 430
thymus	88%	1167.46	573 / 653	13%	0.37	76 / 605
adipose	97%	3167.64	1169 / 1204	0%	0	0 / 0
bladder	86%	1778.43	18 / 21	11%	0.65	53 / 504
heart	92%	1394.80	795 / 861	0%	0	0 / 0
muscle	89%	856.04	717 / 803	0%	0	0 / 0
blood vessel	81%	1510.36	1082 / 1335	0%	0	0 / 0
intestine	41%	320.26	399 / 966	13%	0.41	68 / 527
stomach	35%	473.46	125 / 359	12%	0.33	34 / 286
uterus	18%	190.48	31 / 170	15%	0.97	70 / 459
pancreas	2%	7.45	5 / 328	31%	1.03	55 / 178
lung	11%	76.83	64 / 578	17%	1.36	191 / 1155
brain	4%	17.99	95 / 2642	21%	1.13	148 / 705
tonsil	0%	0	0 / 0	24%	0.62	11 / 45
adrenal gland	6%	30.60	16 / 258	1%	0.06	2 / 230
lymph node	0%	0	0 / 0	7%	0.32	2 / 29
kidney	1%	5.79	1 / 89	3%	0.24	24 / 901
eye	0%	0	0 / 0	1%	0.02	1 / 80
liver	0%	0	0 / 226	1%	0.03	5 / 406
peripheral blood	0%	1.96	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0030198	Biological process	extracellular matrix organization
GO_0021510	Biological process	spinal cord development
GO_0010811	Biological process	positive regulation of cell-substrate adhesion
GO_0005614	Cellular component	interstitial matrix
GO_0005576	Cellular component	extracellular region
GO_0005539	Molecular function	glycosaminoglycan binding

Gene name	VIT
Protein name	Vitrin
Synonyms	UNQ647/PRO1277
Description	FUNCTION: Promotes matrix assembly and cell adhesiveness. Plays a role in spinal cord formation by regulating the proliferation and differentiation of neural stem cells. .
Accessions	Q6UXI7 ENST00000457137.6 [Q6UXI7-3] B5MD45 ENST00000379241.7 [Q6UXI7-2] H7C587 ENST00000404084.5 C9J6F5 ENST00000401530.5 [Q6UXI7-5] ENST00000379242.8 [Q6UXI7-4] ENST00000497382.5 ENST00000464309.1 ENST00000389975.7 [Q6UXI7-1]

VIT report