Insufficient scRNA-seq data for expression of VCX at single-cell level.
Insufficient scRNA-seq data for expression of VCX at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ureter | 0% | 0 | 0 / 0 | 100% | 2.57 | 1 / 1 |
bladder | 52% | 2.90 | 11 / 21 | 29% | 2.12 | 147 / 504 |
brain | 70% | 4.92 | 1842 / 2642 | 1% | 0.01 | 6 / 705 |
lung | 37% | 1.28 | 214 / 578 | 24% | 1.19 | 278 / 1155 |
prostate | 58% | 4.31 | 143 / 245 | 1% | 0.02 | 5 / 502 |
stomach | 51% | 2.86 | 184 / 359 | 6% | 1.75 | 16 / 286 |
thymus | 49% | 2.30 | 322 / 653 | 7% | 0.48 | 45 / 605 |
kidney | 54% | 2.12 | 48 / 89 | 1% | 0.16 | 8 / 901 |
spleen | 55% | 2.48 | 132 / 241 | 0% | 0 | 0 / 0 |
esophagus | 28% | 1.27 | 409 / 1445 | 21% | 1.61 | 38 / 183 |
ovary | 28% | 0.84 | 51 / 180 | 20% | 0.61 | 84 / 430 |
breast | 37% | 1.51 | 170 / 459 | 7% | 0.53 | 82 / 1118 |
adrenal gland | 41% | 1.40 | 106 / 258 | 2% | 0.03 | 5 / 230 |
skin | 23% | 0.76 | 416 / 1809 | 18% | 3.97 | 87 / 472 |
liver | 22% | 0.77 | 49 / 226 | 19% | 0.82 | 76 / 406 |
peripheral blood | 37% | 2.63 | 347 / 929 | 0% | 0 | 0 / 0 |
heart | 32% | 1.05 | 273 / 861 | 0% | 0 | 0 / 0 |
uterus | 21% | 0.68 | 36 / 170 | 10% | 0.97 | 46 / 459 |
adipose | 31% | 1.04 | 373 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 20% | 0.53 | 64 / 328 | 6% | 0.28 | 10 / 178 |
intestine | 20% | 0.55 | 190 / 966 | 3% | 0.25 | 16 / 527 |
muscle | 22% | 0.61 | 175 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 13% | 0.39 | 179 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.36 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 4% | 0.07 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
GO_0006325 | Biological process | chromatin organization |
GO_0007420 | Biological process | brain development |
GO_0007283 | Biological process | spermatogenesis |
GO_0042255 | Biological process | ribosome assembly |
GO_0005730 | Cellular component | nucleolus |
GO_0005634 | Cellular component | nucleus |
GO_0003682 | Molecular function | chromatin binding |
Gene name | VCX |
Protein name | Variable charge X-linked protein 1 (Variable charge protein on X with ten repeats) (VCX-10r) (Variably charged protein X-B1) (VCX-B1) Variable charge X-linked |
Synonyms | VCXB1 VCX1 VCX10R |
Description | FUNCTION: May mediate a process in spermatogenesis or may play a role in sex ratio distortion. FUNCTION: May mediate a process in spermatogenesis or may play a role in sex ratio distortion. . FUNCTION: May mediate a process in spermatogenesis or may play a role in sex ratio distortion. . FUNCTION: May mediate a process in spermatogenesis or may play a role in sex ratio distortion. . |
Accessions | J3KNW2 ENST00000620630.2 ENST00000688183.1 ENST00000381059.7 Q9H320 A0A8I5QKN2 A0A087X1S4 ENST00000692567.1 ENST00000341408.6 |