II. Expression across tissues
sc-RNAseq data
Insufficient scRNA-seq data for expression of USP41 at tissue level.
Tissue | GTEx Coverage  | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| stomach | 64% | 2.20 | 229 / 359 | 9% | 0.39 | 27 / 286 |
| breast | 57% | 2.12 | 261 / 459 | 16% | 0.52 | 177 / 1118 |
| brain | 56% | 1.91 | 1476 / 2642 | 15% | 0.26 | 109 / 705 |
| pancreas | 57% | 2.37 | 187 / 328 | 5% | 0.32 | 9 / 178 |
| lung | 52% | 1.56 | 302 / 578 | 7% | 0.37 | 86 / 1155 |
| thymus | 55% | 1.71 | 358 / 653 | 4% | 0.14 | 24 / 605 |
| adipose | 56% | 2.11 | 670 / 1204 | 0% | 0 | 0 / 0 |
| skin | 42% | 1.03 | 761 / 1809 | 13% | 0.34 | 59 / 472 |
| bladder | 48% | 1.38 | 10 / 21 | 4% | 0.15 | 22 / 504 |
| intestine | 36% | 0.82 | 348 / 966 | 10% | 0.20 | 51 / 527 |
| prostate | 45% | 1.34 | 110 / 245 | 1% | 0.01 | 3 / 502 |
| esophagus | 35% | 0.84 | 504 / 1445 | 5% | 0.19 | 9 / 183 |
| blood vessel | 40% | 1.00 | 531 / 1335 | 0% | 0 | 0 / 0 |
| liver | 39% | 1.19 | 89 / 226 | 0% | 0.00 | 1 / 406 |
| spleen | 39% | 1.11 | 95 / 241 | 0% | 0 | 0 / 0 |
| peripheral blood | 37% | 3.38 | 342 / 929 | 0% | 0 | 0 / 0 |
| adrenal gland | 34% | 0.93 | 88 / 258 | 2% | 0.11 | 5 / 230 |
| uterus | 32% | 0.71 | 55 / 170 | 3% | 0.08 | 15 / 459 |
| muscle | 28% | 0.63 | 228 / 803 | 0% | 0 | 0 / 0 |
| ovary | 24% | 0.62 | 43 / 180 | 4% | 0.07 | 19 / 430 |
| kidney | 25% | 0.54 | 22 / 89 | 0% | 0.01 | 3 / 901 |
| heart | 24% | 0.52 | 210 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 5% | 0.08 | 4 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 2% | 0.12 | 1 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |