Insufficient scRNA-seq data for expression of TWNK at single-cell level.
Insufficient scRNA-seq data for expression of TWNK at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 678.19 | 21 / 21 | 100% | 16.44 | 502 / 504 |
prostate | 100% | 670.80 | 245 / 245 | 100% | 15.42 | 500 / 502 |
ovary | 100% | 727.83 | 180 / 180 | 100% | 15.14 | 428 / 430 |
intestine | 100% | 610.80 | 964 / 966 | 100% | 22.88 | 525 / 527 |
esophagus | 100% | 650.74 | 1442 / 1445 | 99% | 14.84 | 182 / 183 |
uterus | 100% | 700.50 | 170 / 170 | 99% | 16.93 | 455 / 459 |
breast | 100% | 615.10 | 457 / 459 | 100% | 16.58 | 1113 / 1118 |
skin | 100% | 1010.53 | 1808 / 1809 | 99% | 23.57 | 468 / 472 |
brain | 99% | 370.98 | 2614 / 2642 | 100% | 17.56 | 705 / 705 |
stomach | 99% | 500.52 | 355 / 359 | 99% | 18.96 | 283 / 286 |
pancreas | 99% | 459.06 | 324 / 328 | 99% | 10.93 | 176 / 178 |
thymus | 99% | 537.60 | 646 / 653 | 99% | 10.23 | 596 / 605 |
kidney | 99% | 448.85 | 88 / 89 | 96% | 10.02 | 864 / 901 |
adrenal gland | 100% | 1021.89 | 258 / 258 | 90% | 8.24 | 208 / 230 |
liver | 99% | 489.64 | 224 / 226 | 91% | 8.30 | 370 / 406 |
lung | 90% | 357.07 | 519 / 578 | 99% | 14.68 | 1148 / 1155 |
lymph node | 0% | 0 | 0 / 0 | 100% | 21.73 | 29 / 29 |
muscle | 100% | 1047.43 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 722.79 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 15.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.03 | 1 / 1 |
adipose | 100% | 555.74 | 1200 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 17.37 | 79 / 80 |
heart | 94% | 401.44 | 811 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 89% | 303.90 | 1187 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 58% | 500.13 | 539 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071333 | Biological process | cellular response to glucose stimulus |
GO_0006268 | Biological process | DNA unwinding involved in DNA replication |
GO_0006264 | Biological process | mitochondrial DNA replication |
GO_0034214 | Biological process | protein hexamerization |
GO_0006390 | Biological process | mitochondrial transcription |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0042645 | Cellular component | mitochondrial nucleoid |
GO_0005739 | Cellular component | mitochondrion |
GO_0002020 | Molecular function | protease binding |
GO_0016853 | Molecular function | isomerase activity |
GO_0003678 | Molecular function | DNA helicase activity |
GO_0008289 | Molecular function | lipid binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0043139 | Molecular function | 5'-3' DNA helicase activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
GO_0003697 | Molecular function | single-stranded DNA binding |
Gene name | TWNK |
Protein name | C10orf2 protein (cDNA: FLJ21832 fis, clone HEP01571) Twinkle mtDNA helicase Twinkle mtDNA helicase (EC 5.6.2.3) (Progressive external ophthalmoplegia 1 protein) (T7 gp4-like protein with intramitochondrial nucleoid localization) (T7-like mitochondrial DNA helicase) (Twinkle protein, mitochondrial) |
Synonyms | C10orf2 PEO1 |
Description | FUNCTION: [Isoform 1]: Mitochondrial helicase involved in mtDNA replication and repair . Might have a role in mtDNA repair . Has DNA strand separation activity needed to form a processive replication fork for leading strand synthesis which is catalyzed by the formation of a replisome complex with POLG and mtSDB . Preferentially unwinds DNA substrates with pre-existing 5'-and 3'- single-stranded tails but is also active on a 5'- flap substrate . Can dissociate the invading strand of immobile or mobile D-loop DNA structures irrespective of the single strand polarity of the third strand . In addition to its DNA strand separation activity, also has DNA strand annealing, DNA strand-exchange and DNA branch migration activities . .; FUNCTION: [Isoform 2]: Lack DNA unwinding and ATP hydrolysis activities . Does not bind single-stranded or double-stranded DNA . . |
Accessions | A0A2R8Y4V4 A0A2R8YF85 Q96RR1 A0A2R8Y746 ENST00000647109.1 ENST00000476766.5 ENST00000459764.1 ENST00000650396.1 A0A3B3IT76 A0A2R8Y8D3 ENST00000473656.5 ENST00000311916.8 [Q96RR1-1] ENST00000370228.2 [Q96RR1-2] Q9H6V3 ENST00000643860.1 [Q96RR1-3] |