TSNARE1 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	3 studies	26% ± 10%	Explore
interneuron	3 studies	37% ± 15%	Explore
GABAergic neuron	3 studies	42% ± 3%	Explore
glutamatergic neuron	3 studies	51% ± 7%	Explore
oligodendrocyte	3 studies	28% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	34% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	991.50	1445 / 1445	100%	13.81	183 / 183
pancreas	100%	1575.64	328 / 328	100%	13.19	178 / 178
prostate	100%	1494.80	245 / 245	100%	15.62	501 / 502
ovary	100%	1978.51	180 / 180	99%	17.02	427 / 430
thymus	100%	1768.99	653 / 653	99%	15.10	600 / 605
uterus	100%	1676.87	170 / 170	99%	11.32	455 / 459
intestine	100%	1115.60	966 / 966	99%	15.07	520 / 527
skin	100%	1964.59	1801 / 1809	99%	14.48	467 / 472
brain	99%	976.32	2619 / 2642	99%	13.55	700 / 705
kidney	100%	1029.90	89 / 89	98%	11.73	883 / 901
bladder	100%	1201.43	21 / 21	98%	12.66	493 / 504
breast	100%	1298.99	459 / 459	98%	13.02	1092 / 1118
stomach	100%	1011.46	359 / 359	98%	15.18	279 / 286
lung	100%	1062.19	576 / 578	97%	13.58	1126 / 1155
adrenal gland	100%	918.23	258 / 258	95%	9.50	218 / 230
liver	99%	513.79	224 / 226	90%	8.15	366 / 406
eye	0%	0	0 / 0	100%	25.59	80 / 80
spleen	100%	1275.37	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	13.19	45 / 45
ureter	0%	0	0 / 0	100%	10.65	1 / 1
blood vessel	100%	1117.63	1334 / 1335	0%	0	0 / 0
adipose	100%	970.87	1203 / 1204	0%	0	0 / 0
muscle	99%	647.33	793 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	14.80	28 / 29
heart	96%	589.52	830 / 861	0%	0	0 / 0
peripheral blood	74%	502.51	688 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0