Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 18 studies | 60% ± 24% | |
glutamatergic neuron | 12 studies | 50% ± 21% | |
oligodendrocyte precursor cell | 11 studies | 26% ± 11% | |
GABAergic neuron | 10 studies | 35% ± 17% | |
endothelial cell | 6 studies | 35% ± 17% | |
interneuron | 6 studies | 46% ± 18% | |
amacrine cell | 6 studies | 34% ± 19% | |
Mueller cell | 6 studies | 82% ± 20% | |
neuron | 5 studies | 44% ± 25% | |
microglial cell | 5 studies | 34% ± 18% | |
retinal pigment epithelial cell | 5 studies | 87% ± 11% | |
granule cell | 4 studies | 70% ± 22% | |
retinal ganglion cell | 4 studies | 45% ± 23% | |
mesothelial cell | 4 studies | 59% ± 7% | |
GABAergic interneuron | 3 studies | 34% ± 10% | |
epithelial cell | 3 studies | 70% ± 27% | |
macrophage | 3 studies | 38% ± 7% | |
GABAergic amacrine cell | 3 studies | 48% ± 9% | |
glycinergic amacrine cell | 3 studies | 39% ± 30% | |
retinal cone cell | 3 studies | 29% ± 9% | |
oligodendrocyte | 3 studies | 42% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 1973.20 | 89 / 89 | 65% | 2.95 | 587 / 901 |
brain | 100% | 2821.15 | 2635 / 2642 | 56% | 2.53 | 397 / 705 |
ovary | 90% | 650.26 | 162 / 180 | 1% | 0.01 | 3 / 430 |
thymus | 58% | 174.40 | 380 / 653 | 6% | 0.15 | 38 / 605 |
adrenal gland | 40% | 107.48 | 104 / 258 | 11% | 0.26 | 26 / 230 |
blood vessel | 42% | 126.37 | 565 / 1335 | 0% | 0 | 0 / 0 |
adipose | 35% | 130.37 | 418 / 1204 | 0% | 0 | 0 / 0 |
uterus | 25% | 87.26 | 42 / 170 | 3% | 0.06 | 12 / 459 |
heart | 21% | 58.88 | 185 / 861 | 0% | 0 | 0 / 0 |
prostate | 17% | 46.12 | 41 / 245 | 1% | 0.02 | 5 / 502 |
skin | 2% | 5.39 | 37 / 1809 | 11% | 0.23 | 52 / 472 |
spleen | 7% | 16.93 | 17 / 241 | 0% | 0 | 0 / 0 |
stomach | 5% | 11.80 | 19 / 359 | 1% | 0.04 | 4 / 286 |
pancreas | 2% | 5.02 | 7 / 328 | 4% | 0.20 | 7 / 178 |
eye | 0% | 0 | 0 / 0 | 5% | 0.13 | 4 / 80 |
liver | 0% | 0 | 0 / 226 | 4% | 0.11 | 17 / 406 |
lung | 1% | 1.18 | 3 / 578 | 3% | 0.07 | 39 / 1155 |
esophagus | 2% | 4.01 | 22 / 1445 | 2% | 0.02 | 3 / 183 |
breast | 2% | 5.68 | 10 / 459 | 0% | 0.01 | 3 / 1118 |
intestine | 0% | 0.66 | 2 / 966 | 1% | 0.03 | 7 / 527 |
bladder | 0% | 0 | 0 / 21 | 1% | 0.03 | 5 / 504 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006812 | Biological process | monoatomic cation transport |
GO_0051262 | Biological process | protein tetramerization |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_0030001 | Biological process | metal ion transport |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0005262 | Molecular function | calcium channel activity |
GO_0005261 | Molecular function | monoatomic cation channel activity |
Gene name | TRPM3 |
Protein name | Transient receptor potential cation channel subfamily M member 3 (Long transient receptor potential channel 3) (LTrpC-3) (LTrpC3) (Melastatin-2) (MLSN2) Transient receptor potential cation channel subfamily M member 3 TRPM3 protein (Transient receptor potential cation channel subfamily M member 3) TRPM3 protein Transient receptor potential cation channel subfamily M member 3 (Transient receptor potential cation channel, subfamily M, member 3, isoform CRA_c) Transient receptor potential cation channel subfamily M member 3 (Transient receptor potential cation channel, subfamily M, member 3, isoform CRA_a) |
Synonyms | KIAA1616 LTRPC3 hCG_2042991 |
Description | FUNCTION: Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation. In addition, forms heteromultimeric ion channels with TRPM1 which are permeable for calcium and zinc ions . . |
Accessions | ENST00000704573.1 ENST00000704565.1 ENST00000377111.8 [Q9HCF6-10] A0A994J557 ENST00000677713 ENST00000361823.9 [Q9HCF6-12] ENST00000377110.9 [Q9HCF6-2] ENST00000704567.1 A2A3F3 A2A3F4 A0A994J743 ENST00000396285.5 ENST00000358082.7 ENST00000396292.8 ENST00000408909.6 ENST00000357533.6 ENST00000707140.1 A0A994J747 ENST00000677594.1 Q9HCF6 ENST00000677713.2 [Q9HCF6-3] ENST00000704574.1 E9PBI7 H7BYP1 Q8TBK0 Q4VXD4 H0Y3D4 A2A3F7 A0AA34QVQ9 ENST00000377097.3 ENST00000360823.6 Q504Y1 G5E9G1 A0A994J4R7 A0A994J563 ENST00000377105.5 ENST00000396283.5 A0A7I2V4C9 A0A7I2V4E8 ENST00000704566.1 ENST00000704575.1 ENST00000377101.5 Q6NW43 A0A994J7I1 ENST00000396280.9 ENST00000704568.1 A0A994J4I2 |