TREH report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
brush cell	3 studies	33% ± 15%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	97%	68.49	319 / 328	62%	2.11	110 / 178
liver	99%	186.96	224 / 226	57%	3.52	233 / 406
kidney	99%	525.37	88 / 89	57%	3.47	512 / 901
stomach	90%	91.79	322 / 359	47%	1.37	133 / 286
intestine	72%	351.37	697 / 966	45%	1.49	239 / 527
bladder	81%	33.52	17 / 21	18%	0.49	90 / 504
thymus	78%	23.32	509 / 653	17%	0.53	102 / 605
prostate	75%	34.16	184 / 245	3%	0.05	14 / 502
adipose	73%	40.66	880 / 1204	0%	0	0 / 0
esophagus	60%	55.94	860 / 1445	13%	0.30	24 / 183
breast	66%	27.45	303 / 459	2%	0.04	19 / 1118
heart	67%	19.00	579 / 861	0%	0	0 / 0
brain	49%	9.93	1294 / 2642	15%	0.30	109 / 705
lung	51%	10.27	296 / 578	13%	0.41	145 / 1155
uterus	49%	10.03	84 / 170	8%	0.35	36 / 459
ovary	33%	8.32	60 / 180	2%	0.04	9 / 430
skin	25%	6.74	447 / 1809	8%	0.16	37 / 472
blood vessel	28%	6.69	373 / 1335	0%	0	0 / 0
adrenal gland	10%	1.27	27 / 258	2%	0.05	4 / 230
spleen	2%	0.49	6 / 241	0%	0	0 / 0
muscle	1%	0.23	10 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1