TOGARAM2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	38% ± 18%	Explore
astrocyte	6 studies	35% ± 16%	Explore
GABAergic neuron	3 studies	28% ± 8%	Explore
glutamatergic neuron	3 studies	20% ± 4%	Explore
ependymal cell	3 studies	62% ± 15%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	97%	742.81	2550 / 2642	61%	2.05	430 / 705
lung	95%	1019.27	551 / 578	19%	0.57	215 / 1155
spleen	100%	1333.66	241 / 241	0%	0	0 / 0
heart	96%	1491.45	828 / 861	0%	0	0 / 0
muscle	92%	2607.74	739 / 803	0%	0	0 / 0
adrenal gland	77%	341.91	198 / 258	1%	0.02	3 / 230
intestine	72%	211.51	691 / 966	2%	0.05	8 / 527
ovary	54%	141.68	98 / 180	16%	0.42	68 / 430
bladder	62%	125.14	13 / 21	4%	0.08	21 / 504
kidney	63%	163.72	56 / 89	1%	0.02	12 / 901
prostate	60%	190.89	148 / 245	3%	0.06	16 / 502
peripheral blood	63%	331.37	585 / 929	0%	0	0 / 0
stomach	60%	162.28	214 / 359	2%	0.02	5 / 286
esophagus	54%	174.84	782 / 1445	2%	0.04	4 / 183
skin	48%	133.16	871 / 1809	6%	0.09	28 / 472
adipose	53%	147.57	633 / 1204	0%	0	0 / 0
uterus	35%	239.02	59 / 170	12%	0.31	57 / 459
thymus	43%	115.58	283 / 653	1%	0.01	6 / 605
lymph node	0%	0	0 / 0	41%	0.82	12 / 29
breast	36%	110.38	166 / 459	2%	0.04	22 / 1118
pancreas	12%	22.09	39 / 328	16%	0.45	28 / 178
blood vessel	16%	37.54	210 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	13%	0.16	6 / 45
liver	10%	24.86	23 / 226	1%	0.04	6 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1