Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 43% ± 19% | |
oligodendrocyte precursor cell | 14 studies | 53% ± 18% | |
glutamatergic neuron | 12 studies | 69% ± 23% | |
GABAergic neuron | 11 studies | 70% ± 24% | |
neuron | 7 studies | 48% ± 25% | |
interneuron | 6 studies | 78% ± 17% | |
cardiac muscle cell | 6 studies | 55% ± 19% | |
oligodendrocyte | 6 studies | 31% ± 16% | |
microglial cell | 5 studies | 30% ± 15% | |
amacrine cell | 5 studies | 60% ± 24% | |
endothelial cell | 4 studies | 44% ± 20% | |
granule cell | 4 studies | 35% ± 5% | |
Mueller cell | 4 studies | 29% ± 11% | |
retina horizontal cell | 4 studies | 57% ± 13% | |
retinal ganglion cell | 4 studies | 57% ± 11% | |
GABAergic interneuron | 3 studies | 80% ± 9% | |
GABAergic amacrine cell | 3 studies | 74% ± 5% | |
OFF-bipolar cell | 3 studies | 63% ± 13% | |
ON-bipolar cell | 3 studies | 35% ± 4% | |
glycinergic amacrine cell | 3 studies | 56% ± 9% | |
ependymal cell | 3 studies | 43% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 2564.93 | 2628 / 2642 | 99% | 28.71 | 700 / 705 |
prostate | 83% | 538.66 | 203 / 245 | 98% | 10.33 | 492 / 502 |
thymus | 99% | 2070.60 | 649 / 653 | 81% | 12.73 | 491 / 605 |
adrenal gland | 64% | 300.72 | 164 / 258 | 75% | 8.65 | 173 / 230 |
kidney | 65% | 515.76 | 58 / 89 | 73% | 9.68 | 658 / 901 |
heart | 94% | 3660.69 | 809 / 861 | 0% | 0 | 0 / 0 |
muscle | 86% | 777.46 | 688 / 803 | 0% | 0 | 0 / 0 |
intestine | 52% | 261.67 | 502 / 966 | 30% | 1.52 | 157 / 527 |
pancreas | 40% | 164.03 | 132 / 328 | 38% | 3.14 | 68 / 178 |
bladder | 33% | 169.38 | 7 / 21 | 37% | 2.07 | 187 / 504 |
tonsil | 0% | 0 | 0 / 0 | 62% | 9.72 | 28 / 45 |
skin | 3% | 13.04 | 60 / 1809 | 59% | 7.65 | 277 / 472 |
esophagus | 38% | 145.29 | 548 / 1445 | 22% | 2.14 | 41 / 183 |
breast | 23% | 79.54 | 104 / 459 | 25% | 2.05 | 279 / 1118 |
uterus | 22% | 106.99 | 37 / 170 | 23% | 1.63 | 105 / 459 |
stomach | 11% | 37.99 | 38 / 359 | 21% | 1.18 | 60 / 286 |
lymph node | 0% | 0 | 0 / 0 | 31% | 0.90 | 9 / 29 |
lung | 4% | 16.85 | 21 / 578 | 24% | 2.01 | 280 / 1155 |
liver | 0% | 0 | 0 / 226 | 14% | 0.62 | 56 / 406 |
adipose | 8% | 27.73 | 99 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 6% | 0.19 | 5 / 80 |
spleen | 5% | 18.40 | 13 / 241 | 0% | 0 | 0 / 0 |
ovary | 2% | 5.00 | 3 / 180 | 3% | 0.20 | 13 / 430 |
peripheral blood | 4% | 20.46 | 39 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 3% | 16.28 | 42 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
Gene name | TMEM178B |
Protein name | Transmembrane protein 178B |
Synonyms | |
Description | |
Accessions | ENST00000565468.6 H3BS89 |