TMEM178A report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	10 studies	45% ± 24%	Explore
interneuron	5 studies	45% ± 22%	Explore
GABAergic neuron	5 studies	51% ± 19%	Explore
granule cell	4 studies	42% ± 17%	Explore
neuron	3 studies	23% ± 3%	Explore
endothelial cell	3 studies	46% ± 13%	Explore
GABAergic interneuron	3 studies	24% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	26% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	9 studies	34% ± 23%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	8324.92	2635 / 2642	100%	48.29	702 / 705
prostate	92%	807.41	225 / 245	93%	65.17	467 / 502
thymus	95%	981.35	623 / 653	47%	4.60	283 / 605
kidney	100%	2513.79	89 / 89	25%	2.04	222 / 901
ovary	63%	343.68	114 / 180	54%	9.24	234 / 430
adrenal gland	67%	450.39	174 / 258	39%	3.09	90 / 230
ureter	0%	0	0 / 0	100%	4.75	1 / 1
lung	71%	442.29	412 / 578	18%	2.43	209 / 1155
breast	65%	410.78	299 / 459	17%	1.52	187 / 1118
stomach	66%	443.43	237 / 359	6%	0.49	17 / 286
liver	52%	297.87	117 / 226	14%	1.84	56 / 406
bladder	43%	206.33	9 / 21	18%	2.03	90 / 504
intestine	54%	381.86	523 / 966	5%	0.56	27 / 527
uterus	35%	190.56	59 / 170	24%	8.25	112 / 459
blood vessel	56%	297.92	753 / 1335	0%	0	0 / 0
adipose	51%	300.55	613 / 1204	0%	0	0 / 0
esophagus	36%	223.54	517 / 1445	3%	0.13	5 / 183
pancreas	13%	57.84	41 / 328	13%	0.85	24 / 178
skin	20%	90.33	369 / 1809	4%	0.29	21 / 472
heart	16%	62.65	135 / 861	0%	0	0 / 0
spleen	13%	76.11	32 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	13%	1.05	10 / 80
muscle	7%	31.59	58 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45