TM6SF1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
microglial cell	11 studies	29% ± 15%	Explore
macrophage	9 studies	26% ± 7%	Explore
endothelial cell of artery	7 studies	20% ± 5%	Explore
myeloid cell	5 studies	20% ± 3%	Explore
conventional dendritic cell	4 studies	22% ± 3%	Explore
endothelial cell	3 studies	18% ± 4%	Explore
GABAergic neuron	3 studies	37% ± 10%	Explore
glutamatergic neuron	3 studies	44% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	31% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	93%	230.97	2445 / 2642	99%	6.61	696 / 705
thymus	100%	289.85	652 / 653	88%	4.13	535 / 605
breast	100%	334.78	457 / 459	88%	2.92	980 / 1118
lung	100%	379.90	577 / 578	75%	2.31	871 / 1155
bladder	90%	97.57	19 / 21	40%	0.90	200 / 504
uterus	91%	106.17	154 / 170	39%	0.72	178 / 459
intestine	84%	95.26	808 / 966	39%	0.81	203 / 527
prostate	71%	76.60	173 / 245	49%	0.86	246 / 502
esophagus	74%	86.32	1071 / 1445	42%	0.72	77 / 183
kidney	34%	36.33	30 / 89	81%	3.58	730 / 901
adrenal gland	74%	73.28	190 / 258	40%	0.66	91 / 230
ovary	53%	52.51	95 / 180	53%	1.15	230 / 430
stomach	48%	45.77	174 / 359	55%	1.19	156 / 286
adipose	100%	382.65	1204 / 1204	0%	0	0 / 0
muscle	100%	614.43	803 / 803	0%	0	0 / 0
spleen	98%	201.90	237 / 241	0%	0	0 / 0
peripheral blood	97%	473.78	901 / 929	0%	0	0 / 0
skin	48%	45.46	869 / 1809	47%	1.14	223 / 472
blood vessel	95%	185.38	1272 / 1335	0%	0	0 / 0
pancreas	15%	12.77	49 / 328	78%	2.27	139 / 178
heart	90%	189.52	779 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	69%	2.40	20 / 29
tonsil	0%	0	0 / 0	58%	1.12	26 / 45
liver	3%	2.62	7 / 226	16%	0.28	63 / 406
eye	0%	0	0 / 0	14%	0.19	11 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1