SYT6 | OmnibusX

Name	Number of supported studies	Average coverage
microglial cell	7 studies	26% ± 8%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SYT6 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	89%	588.15	2357 / 2642	98%	14.89	690 / 705
pancreas	99%	353.10	326 / 328	11%	0.38	20 / 178
kidney	88%	264.36	78 / 89	20%	0.45	184 / 901
prostate	55%	53.56	134 / 245	42%	1.50	213 / 502
ovary	70%	184.93	126 / 180	2%	0.08	9 / 430
intestine	50%	44.96	484 / 966	1%	0.03	5 / 527
skin	16%	8.39	285 / 1809	33%	3.35	156 / 472
adrenal gland	22%	23.36	57 / 258	22%	2.97	51 / 230
breast	24%	11.51	108 / 459	9%	0.21	106 / 1118
stomach	28%	14.50	99 / 359	0%	0.00	1 / 286
muscle	23%	15.78	182 / 803	0%	0	0 / 0
uterus	3%	1.10	5 / 170	8%	0.50	36 / 459
bladder	10%	3.00	2 / 21	1%	0.02	5 / 504
adipose	9%	6.30	111 / 1204	0%	0	0 / 0
thymus	4%	1.89	23 / 653	2%	0.04	13 / 605
blood vessel	5%	3.21	72 / 1335	0%	0	0 / 0
lung	3%	1.17	15 / 578	3%	0.16	31 / 1155
eye	0%	0	0 / 0	3%	0.06	2 / 80
tonsil	0%	0	0 / 0	2%	0.29	1 / 45
esophagus	1%	0.62	19 / 1445	0%	0	0 / 183
liver	0%	0.15	1 / 226	0%	0.02	1 / 406
heart	0%	0.22	4 / 861	0%	0	0 / 0
peripheral blood	0%	0.22	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0017156	Biological process	calcium-ion regulated exocytosis
GO_0060478	Biological process	acrosomal vesicle exocytosis
GO_0070382	Cellular component	exocytic vesicle
GO_0009898	Cellular component	cytoplasmic side of plasma membrane
GO_0030672	Cellular component	synaptic vesicle membrane
GO_0005829	Cellular component	cytosol
GO_0097038	Cellular component	perinuclear endoplasmic reticulum
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0030276	Molecular function	clathrin binding
GO_0042803	Molecular function	protein homodimerization activity
GO_0000149	Molecular function	SNARE binding
GO_0005509	Molecular function	calcium ion binding
GO_0001786	Molecular function	phosphatidylserine binding
GO_0005544	Molecular function	calcium-dependent phospholipid binding
GO_0019905	Molecular function	syntaxin binding

Gene name	SYT6
Protein name	Synaptotagmin 6 (Synaptotagmin VI, isoform CRA_b) Synaptotagmin 6 Synaptotagmin-6 (Synaptotagmin VI) (SytVI) Synaptotagmin VI
Synonyms	hCG_38646
Description	FUNCTION: May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis. May mediate Ca(2+)-regulation of exocytosis in acrosomal reaction in sperm (By similarity). .
Accessions	ENST00000641643.2 ENST00000610121.5 Q5T7P8 ENST00000609117.5 [Q5T7P8-2] ENST00000607941.5 [Q5T7P8-2] A0A7I2PMW4 V9GYC4 V9GYB1 A0A286YEX2 ENST00000610222.3 [Q5T7P8-1] ENST00000610096.1 ENST00000609577.1 I6L9C3 ENST00000608879.1 V9GYY7 ENST00000608203.1 V9GY33 ENST00000369547.6

SYT6 report