Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 35% ± 18% | |
pancreatic A cell | 4 studies | 29% ± 7% | |
neuron | 4 studies | 33% ± 10% | |
GABAergic neuron | 3 studies | 28% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
pancreas | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 85% | 5648.85 | 2253 / 2642 | 93% | 13.59 | 658 / 705 |
adrenal gland | 17% | 278.89 | 45 / 258 | 73% | 61.91 | 167 / 230 |
pancreas | 6% | 32.61 | 20 / 328 | 49% | 7.21 | 87 / 178 |
skin | 1% | 8.01 | 24 / 1809 | 47% | 2.59 | 221 / 472 |
ovary | 0% | 0 | 0 / 180 | 35% | 2.13 | 151 / 430 |
uterus | 0% | 0 | 0 / 170 | 23% | 1.27 | 105 / 459 |
lung | 0% | 3.41 | 2 / 578 | 18% | 1.06 | 213 / 1155 |
esophagus | 0% | 0 | 0 / 1445 | 15% | 0.70 | 27 / 183 |
intestine | 6% | 29.06 | 56 / 966 | 9% | 1.20 | 45 / 527 |
breast | 0% | 0 | 0 / 459 | 13% | 0.94 | 146 / 1118 |
stomach | 1% | 8.59 | 5 / 359 | 10% | 0.87 | 29 / 286 |
eye | 0% | 0 | 0 / 0 | 11% | 0.23 | 9 / 80 |
bladder | 0% | 0 | 0 / 21 | 9% | 0.63 | 47 / 504 |
liver | 0% | 0 | 0 / 226 | 5% | 0.14 | 21 / 406 |
kidney | 0% | 0 | 0 / 89 | 5% | 0.19 | 41 / 901 |
thymus | 0% | 1.80 | 2 / 653 | 4% | 0.12 | 22 / 605 |
prostate | 0% | 0 | 0 / 245 | 2% | 0.15 | 11 / 502 |
peripheral blood | 0% | 2.00 | 2 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.79 | 2 / 1335 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.70 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048791 | Biological process | calcium ion-regulated exocytosis of neurotransmitter |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0017158 | Biological process | regulation of calcium ion-dependent exocytosis |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0070382 | Cellular component | exocytic vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_1990769 | Cellular component | proximal neuron projection |
GO_0099012 | Cellular component | neuronal dense core vesicle membrane |
GO_0043025 | Cellular component | neuronal cell body |
GO_0031045 | Cellular component | dense core granule |
GO_0030424 | Cellular component | axon |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0005546 | Molecular function | phosphatidylinositol-4,5-bisphosphate binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0000149 | Molecular function | SNARE binding |
GO_0030276 | Molecular function | clathrin binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0019905 | Molecular function | syntaxin binding |
Gene name | SYT5 |
Protein name | Synaptotagmin 5 Synaptotagmin-5 (Synaptotagmin V) (SytV) SYT5 protein (Synaptotagmin V, isoform CRA_b) |
Synonyms | hCG_19984 |
Description | FUNCTION: May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis. Regulates the Ca(2+)-dependent secretion of norepinephrine in PC12 cells. Required for export from the endocytic recycling compartment to the cell surface (By similarity). . |
Accessions | K7EQ59 M0QYJ7 K7EJS7 ENST00000587067.1 K7EJ95 ENST00000354308.8 [O00445-1] ENST00000590851.5 [O00445-2] O00445 ENST00000592470.1 ENST00000537500.5 [O00445-1] ENST00000590859.1 Q05BS5 ENST00000589172.5 ENST00000585461.1 K7EJC4 |