SYT13 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	8 studies	35% ± 20%	Explore
GABAergic neuron	4 studies	43% ± 12%	Explore
type B pancreatic cell	3 studies	54% ± 29%	Explore
neuron	3 studies	20% ± 4%	Explore
retinal ganglion cell	3 studies	44% ± 17%	Explore
enteroendocrine cell	3 studies	31% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	32% ± 15%	Explore
pancreas	3 studies	26% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	90%	1087.48	80 / 89	78%	47.39	705 / 901
pancreas	49%	346.39	162 / 328	90%	56.92	161 / 178
brain	88%	4755.00	2336 / 2642	51%	17.00	359 / 705
stomach	65%	615.06	235 / 359	71%	26.31	203 / 286
intestine	52%	677.96	504 / 966	75%	26.62	397 / 527
prostate	32%	245.44	78 / 245	40%	8.81	200 / 502
thymus	32%	228.50	210 / 653	30%	5.63	180 / 605
heart	54%	555.88	468 / 861	0%	0	0 / 0
breast	0%	1.65	1 / 459	52%	46.86	581 / 1118
ovary	1%	1.93	1 / 180	50%	7.13	215 / 430
adrenal gland	11%	93.75	28 / 258	39%	17.48	90 / 230
esophagus	0%	0.61	2 / 1445	37%	14.08	67 / 183
lung	2%	7.45	9 / 578	27%	9.64	313 / 1155
bladder	0%	0	0 / 21	24%	7.43	120 / 504
uterus	1%	3.69	1 / 170	21%	4.15	97 / 459
liver	0%	1.53	1 / 226	16%	13.56	63 / 406
tonsil	0%	0	0 / 0	4%	0.44	2 / 45
skin	1%	3.65	11 / 1809	3%	0.40	13 / 472
eye	0%	0	0 / 0	3%	0.26	2 / 80
blood vessel	0%	1.10	3 / 1335	0%	0	0 / 0
adipose	0%	0.95	2 / 1204	0%	0	0 / 0
muscle	0%	0.49	1 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1