Insufficient scRNA-seq data for expression of SPRN at single-cell level.
Insufficient scRNA-seq data for expression of SPRN at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1870.87 | 2638 / 2642 | 62% | 2.43 | 438 / 705 |
adrenal gland | 100% | 721.31 | 258 / 258 | 38% | 1.02 | 87 / 230 |
esophagus | 96% | 332.55 | 1389 / 1445 | 27% | 0.59 | 49 / 183 |
ovary | 99% | 380.32 | 179 / 180 | 12% | 0.25 | 50 / 430 |
uterus | 98% | 371.81 | 167 / 170 | 7% | 0.16 | 31 / 459 |
stomach | 97% | 483.19 | 348 / 359 | 8% | 0.12 | 22 / 286 |
thymus | 100% | 705.59 | 653 / 653 | 4% | 0.09 | 23 / 605 |
skin | 98% | 341.06 | 1778 / 1809 | 3% | 0.05 | 14 / 472 |
kidney | 100% | 731.76 | 89 / 89 | 1% | 0.04 | 11 / 901 |
liver | 100% | 1521.72 | 226 / 226 | 1% | 0.02 | 4 / 406 |
prostate | 99% | 722.53 | 243 / 245 | 2% | 0.04 | 8 / 502 |
intestine | 98% | 426.61 | 947 / 966 | 3% | 0.04 | 14 / 527 |
breast | 96% | 330.25 | 441 / 459 | 4% | 0.09 | 48 / 1118 |
spleen | 100% | 890.32 | 241 / 241 | 0% | 0 | 0 / 0 |
lung | 90% | 332.72 | 522 / 578 | 9% | 0.20 | 109 / 1155 |
pancreas | 96% | 320.17 | 314 / 328 | 2% | 0.05 | 4 / 178 |
bladder | 90% | 302.19 | 19 / 21 | 2% | 0.04 | 11 / 504 |
adipose | 90% | 244.45 | 1088 / 1204 | 0% | 0 | 0 / 0 |
muscle | 80% | 186.97 | 642 / 803 | 0% | 0 | 0 / 0 |
heart | 73% | 152.00 | 626 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 58% | 119.22 | 779 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 58% | 146.09 | 540 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005730 | Cellular component | nucleolus |
GO_0098552 | Cellular component | side of membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0031982 | Cellular component | vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0005634 | Cellular component | nucleus |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | SPRN |
Protein name | Shadow of prion protein (Protein shadoo) |
Synonyms | SHO |
Description | FUNCTION: Prion-like protein that has PrP(C)-like neuroprotective activity. May act as a modulator for the biological actions of normal and abnormal PrP (By similarity). . |
Accessions | ENST00000414069.2 ENST00000685335.1 Q5BIV9 |