SPESP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	3 studies	29% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	23% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	97%	115.80	238 / 245	54%	7.89	269 / 502
thymus	97%	107.47	636 / 653	45%	4.00	274 / 605
kidney	96%	94.98	85 / 89	43%	4.01	387 / 901
breast	99%	140.88	453 / 459	39%	5.72	436 / 1118
skin	87%	115.49	1582 / 1809	46%	13.75	216 / 472
brain	92%	75.88	2443 / 2642	37%	1.83	259 / 705
adrenal gland	98%	136.17	254 / 258	30%	4.82	70 / 230
ovary	97%	122.54	175 / 180	30%	5.35	130 / 430
lung	92%	72.00	532 / 578	26%	3.68	298 / 1155
uterus	89%	67.43	152 / 170	28%	4.82	127 / 459
esophagus	92%	95.31	1334 / 1445	24%	3.44	44 / 183
bladder	95%	99.86	20 / 21	21%	2.52	104 / 504
stomach	88%	73.52	317 / 359	16%	1.64	45 / 286
intestine	88%	78.04	850 / 966	13%	1.28	71 / 527
adipose	98%	137.89	1183 / 1204	0%	0	0 / 0
blood vessel	96%	98.62	1277 / 1335	0%	0	0 / 0
heart	93%	111.84	803 / 861	0%	0	0 / 0
pancreas	54%	24.67	177 / 328	37%	1.83	66 / 178
spleen	90%	72.17	218 / 241	0%	0	0 / 0
muscle	85%	54.54	684 / 803	0%	0	0 / 0
liver	57%	27.12	128 / 226	16%	1.82	65 / 406
tonsil	0%	0	0 / 0	44%	5.85	20 / 45
eye	0%	0	0 / 0	35%	16.88	28 / 80
peripheral blood	16%	11.59	144 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.09	1 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1