SPATA1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	3 studies	27% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	19% ± 5%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	99%	33.40	1428 / 1445	5%	0.08	10 / 183
thymus	100%	51.03	652 / 653	4%	0.04	22 / 605
lung	100%	55.57	576 / 578	3%	0.09	30 / 1155
uterus	100%	56.87	170 / 170	2%	0.04	9 / 459
bladder	100%	38.81	21 / 21	2%	0.08	9 / 504
kidney	100%	51.36	89 / 89	2%	0.06	15 / 901
prostate	100%	52.49	245 / 245	2%	0.03	8 / 502
brain	97%	34.83	2573 / 2642	4%	0.06	29 / 705
breast	99%	33.75	455 / 459	2%	0.05	24 / 1118
ovary	99%	37.65	179 / 180	1%	0.02	6 / 430
intestine	100%	47.22	966 / 966	1%	0.02	4 / 527
skin	99%	31.68	1791 / 1809	1%	0.02	7 / 472
liver	100%	43.70	225 / 226	1%	0.01	3 / 406
spleen	100%	101.34	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.11	1 / 1
adrenal gland	98%	28.40	254 / 258	1%	0.01	2 / 230
blood vessel	99%	41.10	1325 / 1335	0%	0	0 / 0
adipose	99%	35.45	1194 / 1204	0%	0	0 / 0
stomach	98%	29.91	353 / 359	1%	0.06	2 / 286
heart	98%	33.16	843 / 861	0%	0	0 / 0
pancreas	95%	23.81	312 / 328	2%	0.06	3 / 178
peripheral blood	95%	67.01	880 / 929	0%	0	0 / 0
muscle	77%	12.69	616 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.04	1 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45