Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 3 studies | 24% ± 5% | |
pericyte | 3 studies | 20% ± 3% | |
fibroblast | 3 studies | 19% ± 3% | |
dendritic cell | 3 studies | 25% ± 7% |
Insufficient scRNA-seq data for expression of SNAPC2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1799.82 | 1445 / 1445 | 100% | 24.20 | 183 / 183 |
ovary | 100% | 1309.59 | 180 / 180 | 100% | 44.33 | 430 / 430 |
adrenal gland | 100% | 1325.20 | 258 / 258 | 100% | 47.73 | 229 / 230 |
skin | 100% | 1558.27 | 1808 / 1809 | 100% | 63.93 | 470 / 472 |
prostate | 100% | 1848.93 | 245 / 245 | 99% | 63.57 | 499 / 502 |
thymus | 100% | 937.82 | 651 / 653 | 100% | 39.32 | 603 / 605 |
uterus | 100% | 3304.82 | 170 / 170 | 99% | 37.04 | 456 / 459 |
brain | 99% | 1226.11 | 2627 / 2642 | 100% | 39.27 | 704 / 705 |
breast | 100% | 1337.90 | 459 / 459 | 99% | 54.10 | 1106 / 1118 |
intestine | 100% | 1697.81 | 966 / 966 | 99% | 29.44 | 521 / 527 |
kidney | 100% | 1050.91 | 89 / 89 | 99% | 24.40 | 889 / 901 |
lung | 100% | 1198.67 | 577 / 578 | 98% | 29.31 | 1136 / 1155 |
stomach | 99% | 1014.12 | 356 / 359 | 99% | 26.83 | 283 / 286 |
bladder | 100% | 2048.62 | 21 / 21 | 98% | 35.24 | 492 / 504 |
pancreas | 96% | 670.92 | 315 / 328 | 99% | 41.66 | 177 / 178 |
liver | 91% | 398.77 | 205 / 226 | 96% | 17.92 | 390 / 406 |
adipose | 100% | 1331.45 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1890.10 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 57.26 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 46.66 | 29 / 29 |
spleen | 100% | 1365.67 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.63 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 26.11 | 1 / 1 |
heart | 97% | 669.61 | 834 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 772.51 | 888 / 929 | 0% | 0 | 0 / 0 |
muscle | 71% | 300.58 | 573 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0009301 | Biological process | snRNA transcription |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
Gene name | SNAPC2 |
Protein name | Small nuclear RNA activating complex polypeptide 2 snRNA-activating protein complex subunit 2 (SNAPc subunit 2) (Proximal sequence element-binding transcription factor subunit delta) (PSE-binding factor subunit delta) (PTF subunit delta) (Small nuclear RNA-activating complex polypeptide 2) (snRNA-activating protein complex 45 kDa subunit) (SNAPc 45 kDa subunit) |
Synonyms | SNAP45 |
Description | FUNCTION: Part of the SNAPc complex required for the transcription of both RNA polymerase II and III small-nuclear RNA genes. Binds to the proximal sequence element (PSE), a non-TATA-box basal promoter element common to these 2 types of genes. Recruits TBP and BRF2 to the U6 snRNA TATA box. |
Accessions | ENST00000221573.11 M0R1L8 M0QXY9 Q13487 ENST00000597584.5 ENST00000595637.1 |