Name | Number of supported studies | Average coverage | |
---|---|---|---|
platelet | 8 studies | 29% ± 8% | |
astrocyte | 7 studies | 27% ± 8% | |
erythrocyte | 4 studies | 27% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 18% ± 2% |
Insufficient scRNA-seq data for expression of SMOX at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3701.13 | 2642 / 2642 | 100% | 155.64 | 705 / 705 |
prostate | 99% | 1399.69 | 243 / 245 | 99% | 51.90 | 497 / 502 |
skin | 99% | 1234.99 | 1798 / 1809 | 95% | 38.79 | 450 / 472 |
stomach | 98% | 1580.03 | 353 / 359 | 92% | 26.24 | 263 / 286 |
pancreas | 90% | 570.27 | 296 / 328 | 94% | 39.32 | 168 / 178 |
uterus | 98% | 1104.37 | 166 / 170 | 85% | 30.33 | 392 / 459 |
intestine | 80% | 485.29 | 776 / 966 | 95% | 29.01 | 502 / 527 |
ovary | 100% | 1302.97 | 180 / 180 | 73% | 12.34 | 315 / 430 |
thymus | 97% | 770.16 | 633 / 653 | 72% | 13.52 | 437 / 605 |
esophagus | 75% | 508.44 | 1077 / 1445 | 93% | 25.25 | 171 / 183 |
kidney | 84% | 1048.29 | 75 / 89 | 82% | 19.69 | 735 / 901 |
lung | 83% | 495.03 | 478 / 578 | 83% | 22.50 | 956 / 1155 |
bladder | 86% | 562.14 | 18 / 21 | 77% | 19.48 | 386 / 504 |
breast | 82% | 575.19 | 376 / 459 | 63% | 12.86 | 707 / 1118 |
adrenal gland | 61% | 361.87 | 157 / 258 | 56% | 10.74 | 128 / 230 |
eye | 0% | 0 | 0 / 0 | 100% | 31.68 | 80 / 80 |
spleen | 92% | 653.31 | 221 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 83% | 685.36 | 1102 / 1335 | 0% | 0 | 0 / 0 |
adipose | 80% | 597.86 | 966 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 80% | 1076.46 | 740 / 929 | 0% | 0 | 0 / 0 |
liver | 28% | 429.87 | 64 / 226 | 50% | 13.33 | 202 / 406 |
heart | 57% | 340.59 | 493 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 53% | 12.57 | 24 / 45 |
muscle | 25% | 112.04 | 197 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.91 | 4 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006598 | Biological process | polyamine catabolic process |
GO_0046208 | Biological process | spermine catabolic process |
GO_0006805 | Biological process | xenobiotic metabolic process |
GO_0006596 | Biological process | polyamine biosynthetic process |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0031965 | Cellular component | nuclear membrane |
GO_0046592 | Molecular function | polyamine oxidase activity |
GO_0052894 | Molecular function | norspermine:oxygen oxidoreductase activity |
GO_0052895 | Molecular function | N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity |
GO_0052901 | Molecular function | spermine:oxygen oxidoreductase (spermidine-forming) activity |
Gene name | SMOX |
Protein name | Spermine oxidase Spermine oxidase (EC 1.5.3.16) (Polyamine oxidase 1) (PAO-1) (PAOh1) |
Synonyms | C20orf16 UNQ3039/PRO9854 SMO |
Description | FUNCTION: Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal. |
Accessions | ENST00000379460.6 [Q9NWM0-1] ENST00000339123.10 [Q9NWM0-2] ENST00000346595.6 [Q9NWM0-3] Q5TE25 ENST00000278795.7 [Q9NWM0-4] ENST00000305958.9 [Q9NWM0-1] ENST00000621355.4 [Q9NWM0-6] Q9NWM0 ENST00000457205.1 |