SMIM6 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	8 studies	41% ± 22%	Explore
renal alpha-intercalated cell	5 studies	66% ± 4%	Explore
enteroendocrine cell	3 studies	39% ± 13%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	648.00	89 / 89	99%	22.60	888 / 901
pancreas	100%	114.65	328 / 328	92%	27.89	164 / 178
stomach	82%	451.04	293 / 359	90%	10.80	257 / 286
liver	100%	123.94	226 / 226	69%	10.64	280 / 406
lung	93%	83.34	539 / 578	50%	6.97	575 / 1155
intestine	51%	74.83	495 / 966	86%	10.68	453 / 527
bladder	43%	35.86	9 / 21	58%	5.22	294 / 504
brain	78%	69.33	2050 / 2642	17%	1.07	123 / 705
esophagus	5%	1.39	68 / 1445	46%	7.73	84 / 183
prostate	29%	6.58	70 / 245	14%	1.09	68 / 502
uterus	15%	12.21	26 / 170	20%	5.09	92 / 459
ovary	8%	2.01	14 / 180	21%	2.42	92 / 430
peripheral blood	28%	10.73	258 / 929	0%	0	0 / 0
breast	7%	1.82	33 / 459	5%	0.54	55 / 1118
adipose	11%	2.76	135 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	10%	0.38	3 / 29
thymus	7%	1.28	43 / 653	1%	0.06	6 / 605
spleen	7%	1.37	18 / 241	0%	0	0 / 0
skin	6%	1.35	111 / 1809	0%	0.01	1 / 472
adrenal gland	2%	0.31	4 / 258	1%	0.20	2 / 230
blood vessel	1%	0.12	7 / 1335	0%	0	0 / 0
muscle	0%	0.18	3 / 803	0%	0	0 / 0
heart	0%	0.02	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1