Insufficient scRNA-seq data for expression of SLC6A5 at single-cell level.
Insufficient scRNA-seq data for expression of SLC6A5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 41% | 67.04 | 1083 / 2642 | 3% | 0.10 | 23 / 705 |
adrenal gland | 6% | 4.15 | 16 / 258 | 10% | 2.10 | 23 / 230 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.43 | 3 / 29 |
ovary | 2% | 1.92 | 4 / 180 | 0% | 0.15 | 1 / 430 |
lung | 1% | 5.55 | 6 / 578 | 0% | 0.03 | 5 / 1155 |
heart | 1% | 0.56 | 11 / 861 | 0% | 0 | 0 / 0 |
stomach | 1% | 0.32 | 2 / 359 | 1% | 0.01 | 2 / 286 |
intestine | 0% | 0.10 | 2 / 966 | 0% | 0.01 | 2 / 527 |
pancreas | 0% | 0 | 0 / 328 | 1% | 0.01 | 1 / 178 |
prostate | 0% | 0.09 | 1 / 245 | 0% | 0 | 0 / 502 |
muscle | 0% | 0.07 | 2 / 803 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.00 | 1 / 406 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.00 | 2 / 901 |
uterus | 0% | 0 | 0 / 170 | 0% | 0.00 | 1 / 459 |
bladder | 0% | 0 | 0 / 21 | 0% | 0.08 | 1 / 504 |
breast | 0% | 0 | 0 / 459 | 0% | 0.01 | 2 / 1118 |
adipose | 0% | 0.06 | 2 / 1204 | 0% | 0 | 0 / 0 |
thymus | 0% | 0.04 | 1 / 653 | 0% | 0 | 0 / 605 |
esophagus | 0% | 0.05 | 2 / 1445 | 0% | 0 | 0 / 183 |
skin | 0% | 0.03 | 2 / 1809 | 0% | 0 | 0 / 472 |
blood vessel | 0% | 0.05 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060012 | Biological process | synaptic transmission, glycinergic |
GO_1903804 | Biological process | glycine import across plasma membrane |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_0006836 | Biological process | neurotransmitter transport |
GO_0005768 | Cellular component | endosome |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0031045 | Cellular component | dense core granule |
GO_0098690 | Cellular component | glycinergic synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0015375 | Molecular function | glycine:sodium symporter activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | SLC6A5 |
Protein name | Transporter Solute carrier family 6 member 5 Sodium- and chloride-dependent glycine transporter 2 (GlyT-2) (GlyT2) (Solute carrier family 6 member 5) SLC6A5 protein |
Synonyms | NET1 GLYT2 |
Description | FUNCTION: Sodium- and chloride-dependent glycine transporter . Terminates the action of glycine by its high affinity sodium-dependent reuptake into presynaptic terminals . May be responsible for the termination of neurotransmission at strychnine-sensitive glycinergic synapses . .; FUNCTION: [Isoform 2]: Lacks sodium- and chloride-dependent glycine transporter activity. .; FUNCTION: [Isoform 3]: Lacks sodium- and chloride-dependent glycine transporter activity. . |
Accessions | Q9Y345 ENST00000298923.11 Q4VAM6 J3KNC4 ENST00000525748.6 [Q9Y345-1] Q4VAM5 Q4VAM4 |